Transcript Information: R_Transcript_88825.p1


Annotated TAIR IDAT3G52380.1
Annotated Gene Namechloroplast RNA-binding protein 33
Annotated Gene Symbol(s)CP33, PDE322
Annotation TypeOrtholog
Chromosome Positionchr3:19421619-19422855 | Forward length=329
E-Value4.9E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0716611257048
Replicate 27.2801242649476
Replicate 38.1727556247579
Condition 2: 8 Hour
Replicate 17.6287619433628
Replicate 28.9892992326374
Replicate 37.8444146399662
Condition 3: 24 Hour
Replicate 13.9224394258389
Replicate 22.438269827099
Replicate 34.0695732332422


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88825.p1 GENE.R_Transcript_88825~~R_Transcript_88825.p1 ORF type:5prime_partial len:199 (+),score=51.57,RRM_1|PF00076.18|3.4e-18,RRM_1|PF00076.18|3.7e-15,RRM_6|PF14259.2|7.6e-11,RRM_6|PF14259.2|5.5e-08,RRM_5|PF13893.2|8.4e-07,RRM_5|PF13893.2|0.00014 R_Transcript_88825:2-598(+)
GGAAATTTGCCTTATTCTATGACTTCTTCCCAGTTGTCTGAGACCTTTATTGAGGCTGGTCAAGTTAGCTCTGCTGAGATTATATATGATAAAGTGACTGATAGGAGTAGAGGGTTTGGGTTTGTCACAATGGGGAGCATTGATGAGGCTAAGGAAGCCATTCGAATGTTTGATGGTTCTCAAATTGGAGGCCGAACTGTGAAGGTGAACTTCCCAGAAGTGCCAAGGGGAGGAGAGAGAAAAGTCATGGGGCCGAAAATCCGAATCAGCAATCAGAGCTTTGTAGATACTCCTTACAAGATCTATGCTGGTAATCTAGGATGGGGTGTCACAACACAAGGGCTTAAATATGCTTTTGCGGAGCAACCTGGGTTTTTGAGTGCTAAGGTGATTTATGAAAGAGATAGTGGAAGGTCCAGAGGCTTCGGCTTTATCTCATTTTCATCTGCTGAGGCTGCAGAATCTGCTCTGATTTCTATGAATGGAGCTGAATTGGAAGGACGACCTTTACGATTGAATATGGCAGCTGACAGATCTCGTTCTAACACTGAAGCCTCTGCTGAGCAGAATGAAGTACTTTCTGCTTTTAGCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88825.p1 GENE.R_Transcript_88825~~R_Transcript_88825.p1 ORF type:5prime_partial len:199 (+),score=51.57,RRM_1|PF00076.18|3.4e-18,RRM_1|PF00076.18|3.7e-15,RRM_6|PF14259.2|7.6e-11,RRM_6|PF14259.2|5.5e-08,RRM_5|PF13893.2|8.4e-07,RRM_5|PF13893.2|0.00014 R_Transcript_88825:2-598(+)
GNLPYSMTSSQLSETFIEAGQVSSAEIIYDKVTDRSRGFGFVTMGSIDEAKEAIRMFDGSQIGGRTVKVNFPEVPRGGERKVMGPKIRISNQSFVDTPYKIYAGNLGWGVTTQGLKYAFAEQPGFLSAKVIYERDSGRSRGFGFISFSSAEAAESALISMNGAELEGRPLRLNMAADRSRSNTEASAEQNEVLSAFSS*

Click here to download the sequence:
Link to NCBI Protein BLAST