Transcript Information: R_Transcript_88832.p1


Annotated TAIR IDAT5G11280.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3597321-3598347 | Forward length=209
E-Value1.4E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 184.176276247489
Replicate 266.556233843896
Replicate 376.615253416257
Condition 2: 8 Hour
Replicate 162.997613699223
Replicate 267.082645523557
Replicate 377.276517058638
Condition 3: 24 Hour
Replicate 177.454737976963
Replicate 275.587440663823
Replicate 383.300779002561


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88832.p1 GENE.R_Transcript_88832~~R_Transcript_88832.p1 ORF type:complete len:206 (+),score=29.25 R_Transcript_88832:151-768(+)
ATGGCGAAGGGCTGGACTAGCGCCAGAATTTCCTCAATTGCTTGTCGCATCTTCTTCTTCCTCATCATCCTCCAGATCCCTCTCTTCAGAGTCCCATGTAGGTCTGGTATGTGCACTACACCGCTGCACGTTACATCTTCCCAATTGGTTGCTAGTGTTATTGTTCCTGTAGCAGCTGTCAAGACTCTTCTTTTCCCTGGAGCTGTTGCCCATGGACTTGTTGAGAAAAGGACTATTCCCAGTTGGAATGATATGCTGGATATCTACAATCTAACAAGTGCAAAAGAGGCCCCTGTGGTTGCTGATCTCAAGCGTTTGGAGGTTCTGGCTGGTAGCTACTTCTGTGTGGCAGGAGCCCTAATTGGCCTTCTAAAACCAGGAAGAATGAGCATGTTCGGTACTCTCCTGGTAGTTTGGGGCCTTATCAAGGAAGGATTCCTGGGCCGACCAGCGAGCACAGAACCTACCGAATCAATCTACGTCTATCCCACGATGTTGCTTGCCATTGTATGTGCCTTTGCATCAGTGAAGTATGACATAAAGAAGGCTATGAGAGGTGCACCGCCTAGGACCGTCGCTAAACCTTTGCAGAGCTCTTCAAAATCCAAGCTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88832.p1 GENE.R_Transcript_88832~~R_Transcript_88832.p1 ORF type:complete len:206 (+),score=29.25 R_Transcript_88832:151-768(+)
MAKGWTSARISSIACRIFFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLVASVIVPVAAVKTLLFPGAVAHGLVEKRTIPSWNDMLDIYNLTSAKEAPVVADLKRLEVLAGSYFCVAGALIGLLKPGRMSMFGTLLVVWGLIKEGFLGRPASTEPTESIYVYPTMLLAIVCAFASVKYDIKKAMRGAPPRTVAKPLQSSSKSKLK*

Click here to download the sequence:
Link to NCBI Protein BLAST