Transcript Information: R_Transcript_88842.p1


Annotated TAIR IDAT5G13340.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4277939-4279397 | Reverse length=242
E-Value8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.268088960759
Replicate 218.277355038648
Replicate 316.314870662008
Condition 2: 8 Hour
Replicate 115.41376390564
Replicate 216.167400180138
Replicate 318.347491310535
Condition 3: 24 Hour
Replicate 118.002884804459
Replicate 214.201047990695
Replicate 318.1872654053


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88842.p1 GENE.R_Transcript_88842~~R_Transcript_88842.p1 ORF type:complete len:278 (+),score=76.08,ARGLU|PF15346.2|1.6e+04,ARGLU|PF15346.2|1.2e-34 R_Transcript_88842:428-1261(+)
ATGGCTCGAAGCATTTCTCGTTCGCCCTCTTATCGCCGGCGATATTCTCCGTCACCGGTCAGTCGCCGCCATAACCGCCGTAGTCGAAGAGATCGCAGCCGTTCTCCTTATAGCCGAAGGAGTCGTTCTAGTTCCCCACGTCGTCGTAGAAGCCGTTCACCTGTTAGACGTCGCAAGAGCCGCTCTCCAACACCGCGGCGTCACAGAAGAAGAAGAAGTAGAACTGCTTCTCCGACTCCTTCTCCAAAGTCCCGTAGTCCGTGTGTTGCATCAGCTGAGCGCAAGGAAGCTATTCAGAAACAGAAAAAGGAAGAAGAGCAAAAGAAAAGGATTCAACATGAGGTAGATTTGAAATTATTAGAAGAAGAGACTGCAAAGAGGATTGAAGAAGCTATACGGAAGAATGTTGAGGACAAGCTGAATTCTGAAGATGTTAAGTTGGAAATTGAAAGGCGCATCGAGGAAGGGCGGAAGAAATTATTTGATGATGTACTTGCCCAGCTTAAGAGAGAGAAGGAAAATGCTCTCATGGAGGCAAGGAAGAAGGAGGTGAGTATATCTCACATGTTGGAACAAGCACGGAGAGAAAGAGAAGAGCTTGACAAGATGCTTGAAGAGAACCGAAGGAGGGTGGAAGAGGCTCAGAGAAAAGAAGCCCTGGAACTGCAGCGAAAATTGGAAGAACGGCAGAGAGAACTTGAGTTGATTCAACGACAAAAGGAAGAGGCTGCTAGAAGAAAGAAGCTCGAAGAGGAAGAGGAACGAGCAAATCAGATACTTTTTGGTAAAAATAAAGCTCGGCCAAAAGCACCTGCTGCTATAGGCCTATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88842.p1 GENE.R_Transcript_88842~~R_Transcript_88842.p1 ORF type:complete len:278 (+),score=76.08,ARGLU|PF15346.2|1.6e+04,ARGLU|PF15346.2|1.2e-34 R_Transcript_88842:428-1261(+)
MARSISRSPSYRRRYSPSPVSRRHNRRSRRDRSRSPYSRRSRSSSPRRRRSRSPVRRRKSRSPTPRRHRRRRSRTASPTPSPKSRSPCVASAERKEAIQKQKKEEEQKKRIQHEVDLKLLEEETAKRIEEAIRKNVEDKLNSEDVKLEIERRIEEGRKKLFDDVLAQLKREKENALMEARKKEVSISHMLEQARREREELDKMLEENRRRVEEAQRKEALELQRKLEERQRELELIQRQKEEAARRKKLEEEEERANQILFGKNKARPKAPAAIGLL*

Click here to download the sequence:
Link to NCBI Protein BLAST