Transcript Information: R_Transcript_88844.p1


Annotated TAIR IDAT5G13340.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4277939-4279397 | Reverse length=242
E-Value4.6E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.309332686995
Replicate 246.191860915856
Replicate 346.054598745949
Condition 2: 8 Hour
Replicate 140.208367702845
Replicate 252.018472493705
Replicate 344.901352587273
Condition 3: 24 Hour
Replicate 142.290697524718
Replicate 240.628108482642
Replicate 343.314615590913


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88844.p1 GENE.R_Transcript_88844~~R_Transcript_88844.p1 ORF type:complete len:95 (+),score=40.55,ARGLU|PF15346.2|9.4e-17 R_Transcript_88844:980-1264(+)
ATGGAGGCAAGGAAGAAGGAGGAACAAGCACGGAGAGAAAGAGAAGAGCTTGACAAGATGCTTGAAGAGAACCGAAGGAGGGTGGAAGAGGCTCAGAGAAAAGAAGCCCTGGAACTGCAGCGAAAATTGGAAGAACGGCAGAGAGAACTTGAGTTGATTCAACGACAAAAGGAAGAGGCTGCTAGAAGAAAGAAGCTCGAAGAGGAAGAGGAACGAGCAAATCAGATACTTTTTGGTAAAAATAAAGCTCGGCCAAAAGCACCTGCTGCTATAGGCCTATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88844.p1 GENE.R_Transcript_88844~~R_Transcript_88844.p1 ORF type:complete len:95 (+),score=40.55,ARGLU|PF15346.2|9.4e-17 R_Transcript_88844:980-1264(+)
MEARKKEEQARREREELDKMLEENRRRVEEAQRKEALELQRKLEERQRELELIQRQKEEAARRKKLEEEEERANQILFGKNKARPKAPAAIGLL*

Click here to download the sequence:
Link to NCBI Protein BLAST