Transcript Information: R_Transcript_88877.p1


Annotated TAIR IDAT1G30580.1
Annotated Gene NameGTP binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10831953-10835454 | Reverse length=394
E-Value9.7E-263
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1132.76140967825
Replicate 2125.0210090611
Replicate 3131.00334235369
Condition 2: 8 Hour
Replicate 1103.39853856204
Replicate 2112.76677627251
Replicate 3111.71282384344
Condition 3: 24 Hour
Replicate 1140.47853182117
Replicate 2138.69686856758
Replicate 3134.04141174077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88877.p1 GENE.R_Transcript_88877~~R_Transcript_88877.p1 ORF type:complete len:395 (+),score=97.90,YchF-GTPase_C|PF06071.9|1.5e-39,MMR_HSR1|PF01926.19|2.3e-21,MMR_HSR1|PF01926.19|6.2e+03,FeoB_N|PF02421.14|5.3e-08,FeoB_N|PF02421.14|2.8e+03 R_Transcript_88877:152-1336(+)
ATGCCTCCGAAGGGCTCAAAATCGAAGGAAGCGCCAGCTGAGCGCCCCATTCTTGGTCGATTTTCATCTCACCTGAAAATCGGAATTGTTGGACTGCCAAATGTCGGCAAGTCAACTCTTTTCAACACACTTACAAAAATGTCAATACCAGCGGAAAATTTTCCTTTTTGTACCATTGAACCTAACGAGGCCCGGGTTAATGTTCCCGATGAGAGATTTGAATGGCTTTGCAAATTATACAAACCTAAGAGTGAGGTATCTGCTTTCTTAGAAATCCATGACATAGCTGGACTTGTTCGAGGTGCTCACCAAGGACAAGGATTGGGAAACAATTTCTTATCTCATATCCAGGCAGTGGATGGGATTTTCCATGTTTTACGTGCATTTGACGATCCTGATATAATCCATGTTGATGATTCTGTGGATCCTGTAAGAGATTTGGAGACAATCAGCGAGGAGCTAAGGCTTAAGGATGTTGATTTCATGGAGAGGAAGATTGAGGACCTTGAGAAAAGTATGAAGAGGAGCAATGACAAACAGCTGAAAGTGGAGCATGAGTGCTGTCTAAAGGTGAAAGCTTGGCTTCAAGAGGGAAAGGACATTCGTTTAGGGGACTGGAAAACTGCTGATGTTGAGATCTTGAATACTTTTCAATTGCTTACTGCAAAACCTGTTGTGTACTTGGTTAACATGACTGAGAGAGATTACCAAAGAAAGAAGAACAAGTTTCTTCCAAAGATCCATTCCTGGGTACAAGAGCACGGAGGTGAACCAATTATTCCATTTAGCGGTGTTTTTGAGAGGAATCTTGCGGACATGCCAGAAGATGAAGCAGCTAAATATTGTGATGAGAACAAGGTCCAGAGTGCCATTCCAAAGATAATAAAGACTGGGTTCTCGGCTATCAATCTGATATACTTCTTCACTGCTGGACCTGATGAGGTAAAGTGTTGGCAAATCAGACGACAAACAAAGGCTCCTCAAGCTGCAGGGACAATTCATACTGATTTTGAGAGAGGTTTTATTTGTGCTGAGGTCATGAAGTTCGATGATCTAAAGGAACTTGGTACTGAGGCCGCTGTGAAGGCCGGTGGCAAGTATCGACAGGAGGGAAAGACATATGTGGTTCAAGATGGTGATATAATCTTCTTCAAGTTCAATGTTTCCGGAGGTGGGAAGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88877.p1 GENE.R_Transcript_88877~~R_Transcript_88877.p1 ORF type:complete len:395 (+),score=97.90,YchF-GTPase_C|PF06071.9|1.5e-39,MMR_HSR1|PF01926.19|2.3e-21,MMR_HSR1|PF01926.19|6.2e+03,FeoB_N|PF02421.14|5.3e-08,FeoB_N|PF02421.14|2.8e+03 R_Transcript_88877:152-1336(+)
MPPKGSKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKMSIPAENFPFCTIEPNEARVNVPDERFEWLCKLYKPKSEVSAFLEIHDIAGLVRGAHQGQGLGNNFLSHIQAVDGIFHVLRAFDDPDIIHVDDSVDPVRDLETISEELRLKDVDFMERKIEDLEKSMKRSNDKQLKVEHECCLKVKAWLQEGKDIRLGDWKTADVEILNTFQLLTAKPVVYLVNMTERDYQRKKNKFLPKIHSWVQEHGGEPIIPFSGVFERNLADMPEDEAAKYCDENKVQSAIPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGTEAAVKAGGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK*

Click here to download the sequence:
Link to NCBI Protein BLAST