Transcript Information: R_Transcript_8888.p1


Annotated TAIR IDAT5G01260.2
Annotated Gene NameCarbohydrate-binding-like fold
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:105367-107045 | Forward length=385
E-Value9.4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9884258557767
Replicate 26.4155362383133
Replicate 36.9356511055017
Condition 2: 8 Hour
Replicate 110.88260664322
Replicate 29.7518290251837
Replicate 38.672436185296
Condition 3: 24 Hour
Replicate 19.4382096380561
Replicate 28.1481928679077
Replicate 38.8766802341306


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8888.p1 GENE.R_Transcript_8888~~R_Transcript_8888.p1 ORF type:complete len:360 (+),score=68.50,CBM_20|PF00686.15|1e-17 R_Transcript_8888:133-1212(+)
ATGGAAGGCCTCATAGGTTCCAACTCCAAGATCTTCGGAGCAGAGTTTCACAGAAATGAGCTAAAAACAATGAGTTTGATGTTCCCACGATCTGCTAAGTTTTGCACCAAATCACTAATTGAGATTTGGACTATGCATCATTTTTTCAACAACAGTTGCTATTCAAGCAATAATGCCCATTTGACCCATTGTCTTCCATTTTCAAACCCTCAGGAATTGGGAATAGAATCTACAGACATTAGCAAGTCAGTTAGGGTGAAATTCCAGGTACAGATCGAGTGCCAGTTTGGCGATCATCTACTCATGGTTGGAGACGACTTGATTCTGGGATCGTGGAATCCCTCCGAAGCTATACCATTCAACTGGTCGGAAGGCCACATGTGGAGTCTTGTGCTGGAAATGCCTGTTGAGAAGACTGTCAGATATAAATTCTTGCTTAAGCAAAGGTCAGGGGAGATCCTGTGGCAAACCGGTCCAGACAGGTTTTTCCAGTCGTGGGAGACTGAGAACATTATAGTTGTCAGTGAGGAATGGACAGATGCTGAAGCACAAAAGATTAGCGAGGAGCAGCAGAACATCGATGAGAATGAGGAACTAATTGGTAAAATTTTAGTGGATTCATCCATCATAGGTCTACATCTGCATCACAAACAAGATGTCACACCTATTGTGGCCGATAACATTGGAGTTTCGAGTTCAGATGTGAATGTTCATGCAGAAACAGTTAACAGAGATAGATCGATGCTAAGTGTGGAAGATGGTGCTCACTCAAATGAGAATCCATCATCTAGTGCAAATGCAACCAAGAAAGGTAGAAGTTCAGATAGAAGTCATCAGAAAAAAGTGAGAACGAAAAAAGGTAGCTTGAGAGGGGTAGAGCTGGATCAGAGTTTGGCTGAAGCGGAAGATGAAGGAAGCTTGGTTATCTATGATGAAGGTCCAGTCCTTGTGCCTGGTTTGACGGTGTCATTGATCCCTTCTGAAAAGGTTGATGCCAAAATACAGCAAAAATTTCTTCATGCTGATACGTCACCCGGTCCTGAGGCTGATGCATCTAAAAGTCTTTATGAGCAACATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8888.p1 GENE.R_Transcript_8888~~R_Transcript_8888.p1 ORF type:complete len:360 (+),score=68.50,CBM_20|PF00686.15|1e-17 R_Transcript_8888:133-1212(+)
MEGLIGSNSKIFGAEFHRNELKTMSLMFPRSAKFCTKSLIEIWTMHHFFNNSCYSSNNAHLTHCLPFSNPQELGIESTDISKSVRVKFQVQIECQFGDHLLMVGDDLILGSWNPSEAIPFNWSEGHMWSLVLEMPVEKTVRYKFLLKQRSGEILWQTGPDRFFQSWETENIIVVSEEWTDAEAQKISEEQQNIDENEELIGKILVDSSIIGLHLHHKQDVTPIVADNIGVSSSDVNVHAETVNRDRSMLSVEDGAHSNENPSSSANATKKGRSSDRSHQKKVRTKKGSLRGVELDQSLAEAEDEGSLVIYDEGPVLVPGLTVSLIPSEKVDAKIQQKFLHADTSPGPEADASKSLYEQH*

Click here to download the sequence:
Link to NCBI Protein BLAST