Transcript Information: R_Transcript_88946.p1


Annotated TAIR IDAT1G62750.1
Annotated Gene NameTranslation elongation factor EFG/EF2 protein
Annotated Gene Symbol(s)ATSCO1, ATSCO1/CPEF-G, SCO1
Annotation TypeOrtholog
Chromosome Positionchr1:23233622-23236321 | Reverse length=783
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.699840925788
Replicate 29.7293462787644
Replicate 312.263202955516
Condition 2: 8 Hour
Replicate 17.7909570286689
Replicate 210.474605003889
Replicate 311.344756637742
Condition 3: 24 Hour
Replicate 114.957359254413
Replicate 211.250409838123
Replicate 314.121991281571


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88946.p1 GENE.R_Transcript_88946~~R_Transcript_88946.p1 ORF type:complete len:792 (+),score=205.42,GTP_EFTU|PF00009.23|3.7e-71,EFG_IV|PF03764.14|4.4e-46,EFG_II|PF14492.2|3.8e-31,EFG_C|PF00679.20|1.4e+04,EFG_C|PF00679.20|9.5e+03,EFG_C|PF00679.20|6.3e-25,GTP_EFTU_D2|PF03144.21|1.2e-14,RF3_C|PF16658.1|1.1e-06 R_Transcript_88946:237-2612(+)
ATGGCAGGAGAAGCAGTAAGAGTAAGGGGGACAGTAGAACCCTTATGCAACATCAATGGTTCAAGAGGAAGGCCACTCTCTCTCTCCTCTCAACGACGTCGTGGCCGTGTTTCTGCTGCCACTCGTAATATTATTACCAATAGACGCTGTCTTTCATCTCTTGCTTCTTCTTCACTCTCTGACTTCATTGGCCGTGTTCGTATTAACCTCTCTAATGTGCAGTCTTTACAACCCCAACAAAGGAAGAACTTCTCTGTTTTTGCTATGGCTGCTGATGAGTCTAAGCGTGAGGTGCCATTGAAAGATTATCGTAATATTGGAATTATGGCTCACATCGATGCTGGAAAGACTACTACAACAGAGAGGATCCTGTACTATACCGGAAGAAACTACAAGATTGGTGAGGTGCATGAGGGGACTGCAACTATGGACTGGATGGAGCAAGAGCAAGAAAGAGGGATCACCATCACTTCTGCTGCAACTACAACCTACTGGAACAAGCACCGCATCAACATTATTGATACTCCTGGCCATGTCGACTTCACACTGGAGGTGGAGCGGGCTCTTAGGGTTCTGGATGGTGCTATATGCTTGTTTGACAGTGTTGCTGGGGTGGAACCACAGTCTGAAACTGTGTGGAGACAAGCAGATAAATATGGGGTGCCTCGGATATGTTTCGTTAACAAGATGGACCGCCTTGGTGCAAACTTCTTTAGGACAAGAGATATGATAGTCACTAATTTGGGTGCTAGACCTCTGGTGATTCAGTTGCCTATTGGTGCTGAGGACACTTTTAAGGGAGTTATTGATCTTGTGAAAAAGCAAGCTATTGTTTGGTCAGGTGAAGAGTTGGGTGCAAAGTTCAATTGTGAGGAAATTCCTGCAGATCTTCAGGAGATGGCAGCTGATTACCGGGCACAGCTTATAGAAACAATAGTAGAATTAGATGATGAGGCCATGGAGAATTATTTGGAGGGGAAGGAACCTGATGAGGAAACAATTAAGAAACTAATTAGAAAAGGAACCATCTCAGCCAGCTTTGTGCCAGTTATGTGTGGTTCGGCATTTAAAAATAAGGGTGTTCAACCTTTGCTTGATGCAGTGGTAGATTATCTGCCTGCACCAATTGACTTGCCTGCAATGAAGGGTACTGATCCTGAAAACCCTGAATTGGTCTTGGAGAGGGAGGCTAAAGATGATGAACCATTTGCCGGATTGGCTTTCAAGATCATGAGCGACCCATTTGTGGGTTCCCTTACATTTGTGAGAGTTTATGCTGGTAAGCTAGCGGCTGGGTCTTATGTATTGAATTCAAACAAGGGAAAGAAAGAAAGAATTGGCAGGCTCTTGGAAATGCATGCGAACAGCAGAGAGGATGTTAAGGTGGCATTAACAGGTGATATAATTGCTCTTGCTGGGCTCAAAGATACCATTACTGGTGAAACACTGTGTGATCCTGAGAAGCCTATAGTTCTTGAACGAATGGATTTCCCTGACCCCGTCATTAAGGTTGCTATTGAGCCCAAGACTAAGGCTGATATTGACAAAATGGCAACTGGTTTAATAAAGCTTGCCCAAGAAGATCCATCATTCCACTTTTCACGTGATGAAGAGATCAATCAGACAGTCATTGAAGGAATGGGTGAACTACACCTTGAGATTATTGTCGACCGGCTCAAAAGGGAGTTTAAGGTCGATGCTAATGTCGGTGCACCACAAGTGAACTACCGTGAAAGTATATCCAAGGTTTCGGAAGTGAAATATGTTCACAAGAAACAGTCAGGTGGGCAGGGTCAGTTTGCTGATATTACAGTGCGCTTTGAACCCTTGGAGCCTGGCAGTGGGTACGAGTTTGTCAGTGAAATAAAGGGAGGTGCAGTCCCCAAGGAATATATCCCTGGGGTAGTGAAGGGATTGGAAGAGTGTATGAACAACGGTGTGCTTGCAGGCTTTCCTGTGGTCGATGTGCGTGCTGCCTTGGTGGATGGTTCATACCATGATGTTGATTCTAGTGTGCTAGCGTTCCAGCTGGCAGCCAGAGGGGCTTTCAGGGAGGGAATGAGGAAAGCTGGTCCAAAGATGTTGGAGCCAATAATGAAAGTCGAAGTTGTTACACCTGAAGAGCACTTGGGAGATGTGATTGGTGATCTCAACTCCAGGAGAGGGCAAATCAATAGCTTTGGTGACAAGCCTGGTGGTCTAAAGGTAGTGGATTCTTTGGTTCCCTTGGCAGAGATGTTCCAGTATGTGAGTACATTGCGGGGCATGACAAAAGGGCGTGCATCCTACACGATGCAACTAGCCAAATTCGATGTCGTTCCCCAGCATATTCAGAACCAGCTTGCTGCCACGAAGGAGGAATCTGTTGCTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88946.p1 GENE.R_Transcript_88946~~R_Transcript_88946.p1 ORF type:complete len:792 (+),score=205.42,GTP_EFTU|PF00009.23|3.7e-71,EFG_IV|PF03764.14|4.4e-46,EFG_II|PF14492.2|3.8e-31,EFG_C|PF00679.20|1.4e+04,EFG_C|PF00679.20|9.5e+03,EFG_C|PF00679.20|6.3e-25,GTP_EFTU_D2|PF03144.21|1.2e-14,RF3_C|PF16658.1|1.1e-06 R_Transcript_88946:237-2612(+)
MAGEAVRVRGTVEPLCNINGSRGRPLSLSSQRRRGRVSAATRNIITNRRCLSSLASSSLSDFIGRVRINLSNVQSLQPQQRKNFSVFAMAADESKREVPLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTYWNKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGARPLVIQLPIGAEDTFKGVIDLVKKQAIVWSGEELGAKFNCEEIPADLQEMAADYRAQLIETIVELDDEAMENYLEGKEPDEETIKKLIRKGTISASFVPVMCGSAFKNKGVQPLLDAVVDYLPAPIDLPAMKGTDPENPELVLEREAKDDEPFAGLAFKIMSDPFVGSLTFVRVYAGKLAAGSYVLNSNKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKDTITGETLCDPEKPIVLERMDFPDPVIKVAIEPKTKADIDKMATGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVDANVGAPQVNYRESISKVSEVKYVHKKQSGGQGQFADITVRFEPLEPGSGYEFVSEIKGGAVPKEYIPGVVKGLEECMNNGVLAGFPVVDVRAALVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPKMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQNQLAATKEESVAA*

Click here to download the sequence:
Link to NCBI Protein BLAST