Transcript Information: R_Transcript_88948.p1


Annotated TAIR IDAT1G69160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits to 172 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other Eukaryotes - 29 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26000315-26001280 | Forward length=321
E-Value1.6E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.304974953415
Replicate 27.0618187586348
Replicate 36.947689180815
Condition 2: 8 Hour
Replicate 13.6765562983852
Replicate 23.760388537857
Replicate 32.6164483777134
Condition 3: 24 Hour
Replicate 15.3085620316313
Replicate 22.1194242777732
Replicate 34.8639343748661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88948.p1 GENE.R_Transcript_88948~~R_Transcript_88948.p1 ORF type:complete len:333 (+),score=72.56 R_Transcript_88948:190-1188(+)
ATGTCAATCACAGGGGTGGTAGACTGCAAGAAACCCTCCCACCGGAGAAACGACTCCGGTGAGCTCGACGTGTTCGAGGCAGCTCGGTACTTCTCGGAGTACAATGACAACTTTACCCTTGTTGGAGGTTCACATAGGAACCACCACCCAATGATGGTGATACAAGAAGAAAGAGATCATCAAGGGCATGCTATTAGAAAAGGAAGAATTAGCCTTGACATTCCCTCTTTAAAACACCACCACTATTACCACCACCACCACCAACAACAACACCAACAACAACAACAAGTCAAAGAGAAGAAACACAAACAACCAAGTTCACCAGGAGGTAAACTAGCACACTTCTTGAACTCCCTCTTTAGCCAAACAATTAGCTCCAAGAAGAAGAAATCATCATCAAAGTCATCATCATCATCATCCACTACACAATCAATGAAGGATATTATCATCAATGATGATGAGAGCCCTAATGGCAGAAGAAAAAGAAGGAGCAGTATAAGCCATTTTAGCCTTAGGTCTACAAACTCAAGCAGTGCTATTGTTGATACAAAATCTCTTTACTCTTGTTCTTCAGGTACTAATTCAGGTTTTAGAACCCCTCCTCCTTATGCTCTCAACACACCCACTAAATCTTACAGAGAATTTAGGAGCTTCAATTCTGATCATAATAATAAGGAAGTCTTAGCTAAGAAGGAATATGATCAGAAACACAAGTTCATCAAAAATGGGGTTGTTGAGAAACCAAAGAATAACATTAGTAAAAACAACAATCATGGGTATTTTCAAGAGAAAAAGAGGGATCATCAAGTTAGCAAATTCAAGGAAGAAATAGATGATGGGGCTGAAAGTGATTCAAGTTCTGATTTATTTGAACTGCAAATGGATTATGGATTTGGGTTTTGCTCAAGTGGGTTGCCTGTTTATGAGACTACTCATATGGATAACATCAAGAGATCTTCAACCACTCATGCAATCACCAATGGCCCCTTCAAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88948.p1 GENE.R_Transcript_88948~~R_Transcript_88948.p1 ORF type:complete len:333 (+),score=72.56 R_Transcript_88948:190-1188(+)
MSITGVVDCKKPSHRRNDSGELDVFEAARYFSEYNDNFTLVGGSHRNHHPMMVIQEERDHQGHAIRKGRISLDIPSLKHHHYYHHHHQQQHQQQQQVKEKKHKQPSSPGGKLAHFLNSLFSQTISSKKKKSSSKSSSSSSTTQSMKDIIINDDESPNGRRKRRSSISHFSLRSTNSSSAIVDTKSLYSCSSGTNSGFRTPPPYALNTPTKSYREFRSFNSDHNNKEVLAKKEYDQKHKFIKNGVVEKPKNNISKNNNHGYFQEKKRDHQVSKFKEEIDDGAESDSSSDLFELQMDYGFGFCSSGLPVYETTHMDNIKRSSTTHAITNGPFKN*

Click here to download the sequence:
Link to NCBI Protein BLAST