Transcript Information: R_Transcript_88954.p2


Annotated TAIR IDAT5G09530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2960080-2961192 | Reverse length=370
E-Value4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8370346530005
Replicate 21.7846855353853
Replicate 32.405207447596
Condition 2: 8 Hour
Replicate 112.487791123095
Replicate 215.988030516448
Replicate 322.417239116178
Condition 3: 24 Hour
Replicate 111.364114577714
Replicate 27.719340611702
Replicate 310.506098249711


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88954.p2 GENE.R_Transcript_88954~~R_Transcript_88954.p2 ORF type:3prime_partial len:200 (+),score=35.84 R_Transcript_88954:120-716(+)
ATGGCGTTACGCTGCTCTTTGCTAGCACTATTGCTAGCCATGTGCCTCTTGATGAGTGGCAACACAAGGCCTGTCGATGCTCGCCGCCTTCTAGAAGATTCGCCGGAGATCCCAAAGCCTAAGGTCCCAGAAGTTCCAAAGCCCGAGGTCCCAGAACTTCCAAAGCCCACAATCCCGGAGCTACCCAAGCCCAATGTGCCAGAGCTTCCAAAGCCTGAGATGCCAAAACTACCAGAATTGCCTAAGCCCGCAGTTCCTGAAGTACCAAAGCCGGAAATACCAAAATTGCCTGAACTCCCAAAGCCCACAGTGCCTGAGGTTCCAAAACCCGAAAGGCCAAAAATGCCTGAACTCCCAAAGCCCACAGTACCTGAGGTTCCAAAGCCCGAAACGCCAAAAATGCCTGAACTCCCTAAGCCCATAATTCCTGAAGTACCAAAGTCCGAGATGCCAAAAATGCCTGAACTCCCAAAGCCCACAGTGCATGAGGTTCCAAAGCCTGAGATCCCAAAAATGCCTGAACTTCCTAAGCCTACAGTTCCTAAAGTACCAAAGTCCGAGATGCCAAAATTGTCGGAACTCCCAAAGCCCACGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88954.p2 GENE.R_Transcript_88954~~R_Transcript_88954.p2 ORF type:3prime_partial len:200 (+),score=35.84 R_Transcript_88954:120-716(+)
MALRCSLLALLLAMCLLMSGNTRPVDARRLLEDSPEIPKPKVPEVPKPEVPELPKPTIPELPKPNVPELPKPEMPKLPELPKPAVPEVPKPEIPKLPELPKPTVPEVPKPERPKMPELPKPTVPEVPKPETPKMPELPKPIIPEVPKSEMPKMPELPKPTVHEVPKPEIPKMPELPKPTVPKVPKSEMPKLSELPKPTV

Click here to download the sequence:
Link to NCBI Protein BLAST