Transcript Information: R_Transcript_88959.p2


Annotated TAIR IDAT5G09530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2960080-2961192 | Reverse length=370
E-Value6.4E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0235305208254
Replicate 21.9622710669437
Replicate 30.8563266391085
Condition 2: 8 Hour
Replicate 18.4670747948418
Replicate 27.7322675525595
Replicate 310.008832024325
Condition 3: 24 Hour
Replicate 13.2183841907996
Replicate 23.7102304675738
Replicate 34.2957177422883


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88959.p2 GENE.R_Transcript_88959~~R_Transcript_88959.p2 ORF type:3prime_partial len:107 (-),score=22.56 R_Transcript_88959:3-320(-)
ATGCCAAAAATTCCTGACCTCCCAAAGCCCACACTGCCTGAACTTCCAAAACCCGCAGTACCTGAGATTCCAAAATCCCAAATACCTAATGTTCCAAAGCCCGAGATGCCCAAAATGCCTGAATTCCCAAAGCCCACACCACCAGAAGTCCCAAAACATGAAATGCCAAAAATTCCTGAACTCCCAAAGCCCACAATGCCTGAAGTTCCAAAGCCCGAGTTGCCAAAAATGCCTGAACTCCCTAAGCCCACAATTCCTAAAGTACCAAAACCCGAGATGCCAAATTTGCCTGAGCTCCCAAAACCCGTAGTTCCTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88959.p2 GENE.R_Transcript_88959~~R_Transcript_88959.p2 ORF type:3prime_partial len:107 (-),score=22.56 R_Transcript_88959:3-320(-)
MPKIPDLPKPTLPELPKPAVPEIPKSQIPNVPKPEMPKMPEFPKPTPPEVPKHEMPKIPELPKPTMPEVPKPELPKMPELPKPTIPKVPKPEMPNLPELPKPVVPE

Click here to download the sequence:
Link to NCBI Protein BLAST