Transcript Information: R_Transcript_88988.p1


Annotated TAIR IDAT3G54720.1
Annotated Gene NamePeptidase M28 family protein
Annotated Gene Symbol(s)AMP1, COP2, HPT, PT, MFO1
Annotation TypeOrtholog
Chromosome Positionchr3:20254852-20257815 | Reverse length=705
E-Value5.5E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1308644252838
Replicate 23.4357582499397
Replicate 38.7462089003491
Condition 2: 8 Hour
Replicate 15.1197717616967
Replicate 25.7935012043072
Replicate 39.3233272731988
Condition 3: 24 Hour
Replicate 17.0960495067449
Replicate 26.9173311974992
Replicate 37.7601862071727


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88988.p1 GENE.R_Transcript_88988~~R_Transcript_88988.p1 ORF type:5prime_partial len:220 (+),score=52.94,Peptidase_M28|PF04389.13|7.9e-15 R_Transcript_88988:1-660(+)
GAGGGGGAGTACGTAAGCGGGGTTGAGAGGGGGACGGTTATGAAGGGGTTGGGGGACCCACTTAGCCCTGGTTGGGCTAGTGTTGTAGAGGGAGGAGAGACACTAGGTAGGGATGAGAATGAGGTGGTGGAGAGGTTCCCTAAGATACCTTCTTTGCCTATTTCTGTGGAGACAGCTGAGGTTATTTTGAGGTCACTTGAGGGACCTCAGGTGCCCCAGGATTGGAGGGATAATGCATTGAAATCTAAGAATTTGAGAGTTGGTCCTGGTCCTACTGTGCTCAACTTCACTTACCAGGCAGAGGAAAAGATGGCCACAATTCATGATGTTTTTGCTGTTATTAGGGGATCAGAAGAACCTGACCGCTATGTACTTCTAGGAAACCATAGAGATGCATGGACCTTTGGTGCAGTTGATCCTAACAGTGGAACAGCTGCACTACTTGATGTTGCACGTAGGTTTGCCTTTTTGATGCGCCTGGGATGGAATCCTCGCAGAACCATTATTCTCTGCAGTTGGGATGCTGAAGAGTTTGGGATGATAGGTTCAACAGAATGGGTTGAGCAAAACATCATGACTCTTGGCTCCGGGGCGGTTGCCTATTTAAATGTAGATTGTGCAGTTCAAGGCCCTGGATTATTTGCTAGGATGACTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88988.p1 GENE.R_Transcript_88988~~R_Transcript_88988.p1 ORF type:5prime_partial len:220 (+),score=52.94,Peptidase_M28|PF04389.13|7.9e-15 R_Transcript_88988:1-660(+)
EGEYVSGVERGTVMKGLGDPLSPGWASVVEGGETLGRDENEVVERFPKIPSLPISVETAEVILRSLEGPQVPQDWRDNALKSKNLRVGPGPTVLNFTYQAEEKMATIHDVFAVIRGSEEPDRYVLLGNHRDAWTFGAVDPNSGTAALLDVARRFAFLMRLGWNPRRTIILCSWDAEEFGMIGSTEWVEQNIMTLGSGAVAYLNVDCAVQGPGLFARMTP*

Click here to download the sequence:
Link to NCBI Protein BLAST