Transcript Information: R_Transcript_88994.p1


Annotated TAIR IDAT5G35740.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13910572-13911095 | Reverse length=119
E-Value2.6E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.597171676876
Replicate 235.993657856511
Replicate 335.505443274036
Condition 2: 8 Hour
Replicate 119.763590993134
Replicate 215.49289670425
Replicate 311.409583818529
Condition 3: 24 Hour
Replicate 129.025227709312
Replicate 239.699466003039
Replicate 315.477734028592


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_88994.p1 GENE.R_Transcript_88994~~R_Transcript_88994.p1 ORF type:5prime_partial len:140 (+),score=25.49,X8|PF07983.9|2.6e-22 R_Transcript_88994:3-422(+)
GCTATTCCACCTTTGTCTGTACACAATTCTTCTCAGCCTCTACATACTACATACATTACAATGTCTCTCCCTTCCATCAAATTCTTGCTTCCTCTTCTCCTCCTCTTCGTTGTTGTTCCGCGAATTTCAGGGGAAGAGGGGGAAGGGCAATGGTGTGTAGTTGATGTGCAGACCCCAGATGATGAGTTGCAAGGAGCAATAAACTGGGCATGTGGGGAAGGAGGTGCAGACTGTACAAACATCCAAGAGAATCAACCATGCTACTGGCCTAACACAGTGCAGGACCATGCTTCTTATGCCTTTAACAGCTATTATCAGAAGTTCAAGAACCAAGGTGCCAGTTGCTACTTCAATGGTGCTGCCATTATCACCGAGCTCGACCCCAGTCATGACAACTGCCACTTTGAATATCTCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_88994.p1 GENE.R_Transcript_88994~~R_Transcript_88994.p1 ORF type:5prime_partial len:140 (+),score=25.49,X8|PF07983.9|2.6e-22 R_Transcript_88994:3-422(+)
AIPPLSVHNSSQPLHTTYITMSLPSIKFLLPLLLLFVVVPRISGEEGEGQWCVVDVQTPDDELQGAINWACGEGGADCTNIQENQPCYWPNTVQDHASYAFNSYYQKFKNQGASCYFNGAAIITELDPSHDNCHFEYLP*

Click here to download the sequence:
Link to NCBI Protein BLAST