Transcript Information: R_Transcript_89019.p1


Annotated TAIR IDAT2G28450.1
Annotated Gene Namezinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12162180-12165761 | Reverse length=809
E-Value1.3E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.028774174874
Replicate 28.7267501730271
Replicate 311.453368798076
Condition 2: 8 Hour
Replicate 19.9644710951568
Replicate 211.457871216389
Replicate 312.498937834137
Condition 3: 24 Hour
Replicate 116.09325196483
Replicate 214.092380060357
Replicate 315.153026321698


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89019.p1 GENE.R_Transcript_89019~~R_Transcript_89019.p1 ORF type:complete len:806 (+),score=182.99,tRNA_U5-meth_tr|PF05958.7|4.6e+03,tRNA_U5-meth_tr|PF05958.7|1.3e-07,tRNA_U5-meth_tr|PF05958.7|8.1e-08,tRNA_U5-meth_tr|PF05958.7|1.1e+03,Methyltransf_31|PF13847.2|2.3e-12,Methyltransf_18|PF12847.3|6.5e-07 R_Transcript_89019:103-2520(+)
ATGACTTCATCACCTGATACCAAAACCTCAACAATGGACACTCAAAACCCTTCCACAGCAACCGAACCCGACTCCGAAACGGGTCAGAAACGCAAGAGAGAAGAAGACCCGGAAACCCAAATCGGGTCGGACCCAAAAAAGCCCGTTCACCCACTTTACAAGACAAGCTTGTGCTCCTACTACAGGGGCCGTTCTGGGGTTTGCAGCCATGGTGATGGCTGCCGGTTTGCCCATTCTGAGGAGGAGCTCCGGCCCAGGCCCGACGGGTCGTGGGACCCGACATCGGAACGGGCCAAGAGAGAGAAGGGTGAGGATGAAAGTGAAGAAGATGAAAGTGTTGTTATGATGACTGAAGTGTTGGGGGAATCTGGTGGTGACCCTCAGCTTAGCAAGTGTTTGATTCATTTGCCTAGGAACTGGGATTCTGATAAGTTGAAGAGTTTTCTTTATGAGCAGGGTGTCATGTACAAATCAGCTAAGAAGAAAAGAGGCATGTCAGTGGCTTTCATAAGTTTTGAAGCTGCAGAACAAGTAAAAAGTTCAACAGAGGTGTTACAAGGAAAAACTCTTGGCAACAAGAAGCTGAAGTTTGGGGATGTGATTCCCAGGTCTTATGATGATAAGATAAAATCTGCTGAGAAAAGTTACTTAAATGTACAAGCTGGAGGAGTTGACGAATCAGAAGTGTCGGTGATTTCACATGATGGTGAAAATGGAGATGAAGTGAATGGTTCGGGTTTAAGGGCAAAGTCTGCTCGTGATGTTGTGGCACCTCTCGCTCATATGCCATATGCTGAACAACTGGAGCAAAAAAAGAACTCTCTGATGCAAATTCTCAAAAGACTTACTCGAAATGCACGTAAAGCATGTCCAAAGGGGGTTCCACTACCAGATTGGGTCGTCAAATCTAGAGAAATAGGTGGTCTTCCATGCAAACTGGAGGGCATAATTGAGTCTCCACTCATTAATGGGTATCGTAACAAGTGTGAGTTTTCAGTTGGGTATTCTGTGCAAGGGAAGCCGACGGTGGGTTTTATGCTCGGTAATTTCAGAGAGGGTGTGACGGCAGTTGAGGAGCCTGTTAACTGCCCAAATGTTTCAGGAATTGCATGCAAATATGCCATGATCTTTCAAGAGTTCTTACAGGATTCAACTTTACCAATTTGGAACAGATTTAATAATTCTGGTTTCTGGCGTCAATTGACTGTTCGGGAAGGACGAAATGCACTACCAGATGCTGAGGTTGAAAGTGAGGCCTATATTTCTGAGGTCATGGTTATGGTTCAGGTGTCTGCAGCAGGACATGATGATGATCTCATAAAAAGTGAACTTCAAAAAATGACGCAAGCATTTGTTACAGGAGCTGCTTCAACTTCTCCTCCTTTGCCTCTAACTGCTTTAGCTCTGCAGGATCATGTAGGAATATCCAATGCAGCTCCTCCTGATGCCCCATTGCGTCCATTGCCAATAACTACTTCAGAAATGAGTTCTGGAGAAGAGGTGGTCAATACTTCCAATGATATCAGAATTCATGACTATATTGGCAGTCTTCAATTCTCCATATCCCCGACCGCATTCTTTCAGGTTAACACACTTGCTGCAGAGAAGCTATATTCTCTTGCTGGAGATTGGGCTGGCCTAGGCCCAGATACCTTACTTTTTGATGTATGCTGTGGGACTGGCACTATTGGCCTGACCTTAGCCAACCGTGTTGGTATGGTAGTGGGCATTGAGATGAATGCTTCAGCAGTGTCTGATGCACAAAGGAATGCTGAGATAAATGGCATCACAAACTGTAAATTCATTTGTTCCAAGGCTGAGGATGTCATGGGACCTTTACTGAGGGAATACGTCGATTCAACAGAGCAACAAGATGAGCCTTCAAATCCTTCAGATAACAATGAAAAACAGAATGAGACAGCAGATAATTTAAATGCAGCACTGGATGCTGGGGAGTGCTTGAATGAAGAGAGCGTGGGAAGTGAGGATGCGGATGGTTCCAGTAACAGCAAACAGGATATACAGAATGATGTCGAGAGGAATACAGTTAAAGCTAGGCGTGACACAAAGCAGCGATTCAAAAATGTTGTTGCTATAGTTGATCCTCCGCGTTCTGGACTTCACCCTGTCGTCTTGAAAGCTCTGAGAACTCATCCGCGTCTAAGGAGGCTTGTGTACATTTCCTGCAACCCTGAAACATTGATGGCAAATGCTATTGAACTGTGCACGCCATTGGCTCAAAAGTCAGAGAAAGGGGGCAAAAACCAAGGATGGAGGAACATGAGTAATGCTAGTCTGGCCCGTCATAGGTTGAAGTCCATGCCTATGTCGGAACCTTTTCAGCCCGTCAAAGCCATGGCGGTTGATTTGTTTCCTCATACACCGCACTGTGAATTGGTAATGCTGCTCGAGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89019.p1 GENE.R_Transcript_89019~~R_Transcript_89019.p1 ORF type:complete len:806 (+),score=182.99,tRNA_U5-meth_tr|PF05958.7|4.6e+03,tRNA_U5-meth_tr|PF05958.7|1.3e-07,tRNA_U5-meth_tr|PF05958.7|8.1e-08,tRNA_U5-meth_tr|PF05958.7|1.1e+03,Methyltransf_31|PF13847.2|2.3e-12,Methyltransf_18|PF12847.3|6.5e-07 R_Transcript_89019:103-2520(+)
MTSSPDTKTSTMDTQNPSTATEPDSETGQKRKREEDPETQIGSDPKKPVHPLYKTSLCSYYRGRSGVCSHGDGCRFAHSEEELRPRPDGSWDPTSERAKREKGEDESEEDESVVMMTEVLGESGGDPQLSKCLIHLPRNWDSDKLKSFLYEQGVMYKSAKKKRGMSVAFISFEAAEQVKSSTEVLQGKTLGNKKLKFGDVIPRSYDDKIKSAEKSYLNVQAGGVDESEVSVISHDGENGDEVNGSGLRAKSARDVVAPLAHMPYAEQLEQKKNSLMQILKRLTRNARKACPKGVPLPDWVVKSREIGGLPCKLEGIIESPLINGYRNKCEFSVGYSVQGKPTVGFMLGNFREGVTAVEEPVNCPNVSGIACKYAMIFQEFLQDSTLPIWNRFNNSGFWRQLTVREGRNALPDAEVESEAYISEVMVMVQVSAAGHDDDLIKSELQKMTQAFVTGAASTSPPLPLTALALQDHVGISNAAPPDAPLRPLPITTSEMSSGEEVVNTSNDIRIHDYIGSLQFSISPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDVCCGTGTIGLTLANRVGMVVGIEMNASAVSDAQRNAEINGITNCKFICSKAEDVMGPLLREYVDSTEQQDEPSNPSDNNEKQNETADNLNAALDAGECLNEESVGSEDADGSSNSKQDIQNDVERNTVKARRDTKQRFKNVVAIVDPPRSGLHPVVLKALRTHPRLRRLVYISCNPETLMANAIELCTPLAQKSEKGGKNQGWRNMSNASLARHRLKSMPMSEPFQPVKAMAVDLFPHTPHCELVMLLER*

Click here to download the sequence:
Link to NCBI Protein BLAST