Transcript Information: R_Transcript_89039.p1


Annotated TAIR IDAT3G24495.1
Annotated Gene NameMUTS Homolog 7
Annotated Gene Symbol(s)MSH7, MSH6-2, ATMSH7
Annotation TypeOrtholog
Chromosome Positionchr3:8912418-8918086 | Reverse length=1109
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9637797247513
Replicate 22.5143022839892
Replicate 32.9273132048702
Condition 2: 8 Hour
Replicate 13.1291141085398
Replicate 22.5178472850665
Replicate 34.1202047342076
Condition 3: 24 Hour
Replicate 15.4163191314691
Replicate 24.0799272478548
Replicate 36.0440578626017


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89039.p1 GENE.R_Transcript_89039~~R_Transcript_89039.p1 ORF type:5prime_partial len:1119 (+),score=242.63,MutS_V|PF00488.17|4e-85,MutS_I|PF01624.16|1.5e-33,MutS_I|PF01624.16|1.2e+04,MutS_III|PF05192.14|2.5e-30,MutS_II|PF05188.13|1.3e-11 R_Transcript_89039:2-3358(+)
TTCACCACCACTATATTCATCTCCTCAATCGCTCTCCTTCCCTTTCTCTCACCTCTCCGACTTTTCATCATGCATCGCCAGACTTCAATCCTCTCTTTCCTCAAGAAATCCTCGCCGGAAAACTACAACTCCGGCACCGGCGCCGATAACCACCACAATCCTTCTTCACGTATCTTCAACGGCGCCATTAAACCTAACAACGGTCACTTGAAAGCAGTCGAAATCACCGGAATCGATACTCCACCGGAGAAGGCTCCTCGTCAGGTTCTCTCAAATGATTTAACTCCCATTGACGACAAGAAATCGTCGATTTTCTCCAGTATTATGCACAAATTCGTCAAGGTTGATGGAAATGAGAAGATTTCTCAGAGGAGCCAAGGAAGTGGTTGTTCATCTGTTGTTTGCTCCATGTTTGACAAGTTCAATGACTGCAAAGAACCTCCTAAGAAGTCTGACACAGCTTATAAGGTTCCTGAAATTCCTGGTGTTGCAAAATCTCAATTGCTGGGCCAACATGGTTCACTGGACATTAAGAGTGATGTGAATATTGGTGGGCCGGAAACACCAGTTGGACGACCTTTTGTTCCACGTGTGAAGAGAATTCAGGAAGATGGTACTAAATTTGAGGACAAAAGTGATCTTAGCCTTACAAATCCTAGCAAAAGAGTGAAATTTCTCCAGGATTCAAAAACAGCAAACAAGCTTCCTCTTCAAGTTTCAGAGACATCTAGTAAGTTTGAGTGGCTTGATCCTTCTCGAATCAGAGATGGAAATGGCAGGCGCCCTGGTGATCCTCTTTATGATAAAAGGACACTTTATATACCACCTGATACTTTGAAGAAAATGTCAGCATCACAGAAACAGTACTGGAGTGTGAAATGCCAATATATGGATGTGCTGCTCTTCTTTAAAGTGGGAAAGTTTTATGAACTCTATGAGCTAGATGCTGAAATAGGACATAAGGAGCTGGATTGGAAGATAACAAATAGCGGTGTGGGAAAATGTAGACAGGTTGGTATTTCTGAGAGTGCGATTGATGATGCTGTTCAGAAGTTGGTTGCCCGCGGGTATAAAGTTGGACGGATGGAGCAGCTGGAGACATCTGATCAAGCAAAAGCAAGGGGTGCAAATGCTGTTATTCCTCGGAAGCTGGTCAATGTGATCACTCCATCGACAGCAGCTGATGAAAATATTGGCCCTGATGCTGTTCATCTTCTTGCAATAAAGGAGGGCTCTCCTGGGGTTGATAGTGGTTCTACCATATTTGGTTTTGCTTTTGTTGACTGTGCTGCTCTTAAATTTTGGATTGGTTCTGTTAGTGATGATGCCTCTTGTGCTTCATTAATGGCTTTGCTGATGCAAGTGTCACCTAAGGAAGTAATTTATGAAAGTGGAGGTTTATCTAGAGAAGCTCAGAAAGTGCTTAAAAAGTACTCTTCTGCAGGTTCAATGGAAGTGCAAATAACTCCAGTACAGCAAGTTAATGGTCTTCTGGATGCTAGAGAAGTGAGAAATATGATCCAGGCTAAGAAATACTTTAAAGGCTCTAACAACCTGTGGGAAATTCTGCTTGATGATGTAGCAAATCACAATTTTACTTTATGTGCTTTGGGTGCCCTTCTTGATCATTTATCCAGATTGATGTTGGATGATATTTTATCAAATGGAGATGTATTACCATATCAAGTTTATAAGGTTTGCCTCAGAATGGATGGGCAGACACTTGTCAATTTGGAGGTGTTTCATAATAATGCTGATGGTGGTTCAGCAGGTACACTTTTCAAATATCTTGATAACTGCGTAACTCATTCGGGAAAGCGGCTTCTAAGGAGTTGGATTTGTCATCCATCAAAAGATGTTGAAAAAATCAATAATAGGCTTAATGTGGTTGAGGCTTTGATGACGCACACAGATATCATGTTAATCATGGCACAATATCTTCGCAAGGTTCCGGATTTAGAGAGGCTTCTTGGCAGGGTTAAGGCTACAGTTAACTCACAAGCTATGCTCCTATTGCCCTTGGTAGGAAAGAAAGCATTCAAACAAAGGGTAAAAGTGTTTGGGACTCTTGTTAAAGGTTTGCGAGTAGGGATGGACTTGTTGATGTTACTACAGAATGAACAACATGTTGCTTCATTATTATCCAAAGTTCTAGATTTTCCAGAGTTTAGTGGGCCTGATGGGCTTAATGAGTTTCTTATCCAATTTGAAGCAGCTATTGATAGTGACTTTCCAAAGTATCAGGATCATGATGCAACAGAACCTGATGCTGAGACACTATCTATTTTGATTGAGTTATTTCTTGAGAAAGCTAACCAATGGTCTCAAGTGATATTTGCCATCAATTGCATAGATGTGTTAAGATCTTTTGCTGCCATCGCAATTGATTCAAGTGGGTCTATGGCTCGGCCTCTTATTTTACCGCAAACCATTTCTGGCACAATGTGCCAGAATAAAAAAGGACCTGTACTTAAGATCAAAGGTCTGTGGCATCCATTTGGCTTAGGAGAACATGGGGTTCCTGTGCCAAATGATATTGCTCTGGGTGAGCATACAGATGACCTTCATCCTCGGACTTTGCTATTGACTGGTCCAAATATGGGTGGCAAATCAACTCTCCTACGTGCTGCATGTCTAGCTGTTATAATGGCTCAGCTTGGCTGCTACGTGCCATGTGAGGTGTGCGTTCTGTCTGTTTCAGACATAATCTTTACTAGGCTTGGTGCAACTGATCGGATCATGACTGGTGAAAGCACTTTTTACATCGAATGCGCAGAAACAGCATCAGTTCTCCAGAATGCAACACAGGATTCTCTTGTTCTTCTTGATGAATTGGGTCGAGGAACAAGCACTTTTGATGGATATGCCATAGCATATGCGGTGTTCCGCCATCTGATTGAAAAGGTGAACTGTCGTTTACTTTTCGCCACTCACTACCACCCACTTACAAAGGAATTTGCTTCCCATCCTTGTGTTTCTCTGCGGCATATGGCCTTTGCTGTGAAGCCAAGGTCCACGATGGGAAGTGAGAACGAATTGGTATTTCTCTATCGGCTTGCTTCTGGTGCATGTCCTGAAAGCTATGGTTTACAAGTGGCTCTTATGGCCGGAATACCTCAACAAATGGTTGAAGATGCTTCAAGTGCTGGTCGAGCAATGAAAGAAATGATAGGGGAAAGCTTCAAGTCGAGTGAGCAACGATCAGAGTTCTCAACCCTTCATGAGCAGTGGCTAAAGACCATAATTTCCCTCTCAAGTTGTGAAGAGAACATTTATAATGACGACATATTTGATACCCTCTTTTGCTTATGGCATGAGCTAAAGAGCTCATACGTGAAATGTCTGGGTTGTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89039.p1 GENE.R_Transcript_89039~~R_Transcript_89039.p1 ORF type:5prime_partial len:1119 (+),score=242.63,MutS_V|PF00488.17|4e-85,MutS_I|PF01624.16|1.5e-33,MutS_I|PF01624.16|1.2e+04,MutS_III|PF05192.14|2.5e-30,MutS_II|PF05188.13|1.3e-11 R_Transcript_89039:2-3358(+)
FTTTIFISSIALLPFLSPLRLFIMHRQTSILSFLKKSSPENYNSGTGADNHHNPSSRIFNGAIKPNNGHLKAVEITGIDTPPEKAPRQVLSNDLTPIDDKKSSIFSSIMHKFVKVDGNEKISQRSQGSGCSSVVCSMFDKFNDCKEPPKKSDTAYKVPEIPGVAKSQLLGQHGSLDIKSDVNIGGPETPVGRPFVPRVKRIQEDGTKFEDKSDLSLTNPSKRVKFLQDSKTANKLPLQVSETSSKFEWLDPSRIRDGNGRRPGDPLYDKRTLYIPPDTLKKMSASQKQYWSVKCQYMDVLLFFKVGKFYELYELDAEIGHKELDWKITNSGVGKCRQVGISESAIDDAVQKLVARGYKVGRMEQLETSDQAKARGANAVIPRKLVNVITPSTAADENIGPDAVHLLAIKEGSPGVDSGSTIFGFAFVDCAALKFWIGSVSDDASCASLMALLMQVSPKEVIYESGGLSREAQKVLKKYSSAGSMEVQITPVQQVNGLLDAREVRNMIQAKKYFKGSNNLWEILLDDVANHNFTLCALGALLDHLSRLMLDDILSNGDVLPYQVYKVCLRMDGQTLVNLEVFHNNADGGSAGTLFKYLDNCVTHSGKRLLRSWICHPSKDVEKINNRLNVVEALMTHTDIMLIMAQYLRKVPDLERLLGRVKATVNSQAMLLLPLVGKKAFKQRVKVFGTLVKGLRVGMDLLMLLQNEQHVASLLSKVLDFPEFSGPDGLNEFLIQFEAAIDSDFPKYQDHDATEPDAETLSILIELFLEKANQWSQVIFAINCIDVLRSFAAIAIDSSGSMARPLILPQTISGTMCQNKKGPVLKIKGLWHPFGLGEHGVPVPNDIALGEHTDDLHPRTLLLTGPNMGGKSTLLRAACLAVIMAQLGCYVPCEVCVLSVSDIIFTRLGATDRIMTGESTFYIECAETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPCVSLRHMAFAVKPRSTMGSENELVFLYRLASGACPESYGLQVALMAGIPQQMVEDASSAGRAMKEMIGESFKSSEQRSEFSTLHEQWLKTIISLSSCEENIYNDDIFDTLFCLWHELKSSYVKCLGCV*

Click here to download the sequence:
Link to NCBI Protein BLAST