Transcript Information: R_Transcript_89065.p1


Annotated TAIR IDAT1G62350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23056653-23057935 | Forward length=196
E-Value9.3E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3166154873044
Replicate 24.3013254325055
Replicate 37.6355791987175
Condition 2: 8 Hour
Replicate 16.5465680588121
Replicate 26.910133624533
Replicate 311.911994469629
Condition 3: 24 Hour
Replicate 18.8483215356776
Replicate 29.4194334845174
Replicate 311.171849267271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89065.p1 GENE.R_Transcript_89065~~R_Transcript_89065.p1 ORF type:5prime_partial len:288 (+),score=49.27,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|0.0035,PPR|PF01535.16|0.36,PPR|PF01535.16|0.00096 R_Transcript_89065:3-866(+)
CCAATTGTATACTTAACTCCTCTCAAGTCTCAACTATCAACTCTCAAGAGTAAATACATTCAAGAAACTCAAATTCTTTTAGTAAGGAAAATATCGATGCTTGGATTCAGACGAACACTACTACGCCGAGCAATTCTCCATTTTCGTCCTAAAACCCTAATTCCCACCACACAACAGCTGTTGTTTCTGCAACACATAACAACCCATACAAGAACAGGCGGTTCATTAGGAAGAAGTTGTTCGAGCCCAAGTGTGTCAATATGGAGGAGAAAGAAAGAGATGGGCAAAGAAGGGTTGATTGTTGCTAAAGAGTTGAAGCGTTTACAATCAAACCCACTTCGTTTACAGCGTTTTATTCAATCCCATGTCTCTCGCCTTCTCAAGTCTGATCTTGTTTCTGTTTTGGCTGAGTTTCAGCGCCAAGATCAAGTCTTTCTCTCTATGAAGTTGTATGATGTAGTGCGTAAAGAGATATGGTACCGCCCAGACATGTTCTTTTACAGGGATATGCTTATGATGCTTGCAAGGAACAAAAAAGTCGAGGAAGCAAAACGGGTATGGGCAGATTTGAAGAGTGAAGAAGTCTTATTTGATCAGCACACTTTTGGCGACATCATGAGGGCCTTTTTGGACAATGGATTGCCCAATGAGGCAATGGAAATATATGATGAAATGAGGCAGTCTCCTGATCCACCCCTCTCATTGCCTTACCGGGTCATTCTGAAAGGACTCATTCCTTACCCTGAGCTACGGGAGAGGGTCAAGGATGACTTTTTAGAGCTTTTCCCTGGTAAATTTGTTTATGATCCTCCAGAAGATCTCTTTGAGGACGAGCAATGGAGAACAGAGTGTGAAGAGGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89065.p1 GENE.R_Transcript_89065~~R_Transcript_89065.p1 ORF type:5prime_partial len:288 (+),score=49.27,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|0.0035,PPR|PF01535.16|0.36,PPR|PF01535.16|0.00096 R_Transcript_89065:3-866(+)
PIVYLTPLKSQLSTLKSKYIQETQILLVRKISMLGFRRTLLRRAILHFRPKTLIPTTQQLLFLQHITTHTRTGGSLGRSCSSPSVSIWRRKKEMGKEGLIVAKELKRLQSNPLRLQRFIQSHVSRLLKSDLVSVLAEFQRQDQVFLSMKLYDVVRKEIWYRPDMFFYRDMLMMLARNKKVEEAKRVWADLKSEEVLFDQHTFGDIMRAFLDNGLPNEAMEIYDEMRQSPDPPLSLPYRVILKGLIPYPELRERVKDDFLELFPGKFVYDPPEDLFEDEQWRTECEED*

Click here to download the sequence:
Link to NCBI Protein BLAST