Transcript Information: R_Transcript_89072.p1


Annotated TAIR IDAT1G62350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23056653-23057935 | Forward length=196
E-Value6.8E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22816201193398
Replicate 20
Replicate 30.28633421995191
Condition 2: 8 Hour
Replicate 10.15303665592028
Replicate 20.27951102301482
Replicate 30.90758053101935
Condition 3: 24 Hour
Replicate 10.2869725903463
Replicate 20.27569073613222
Replicate 30.41039446287933


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89072.p1 GENE.R_Transcript_89072~~R_Transcript_89072.p1 ORF type:5prime_partial len:160 (+),score=15.38 R_Transcript_89072:3-482(+)
CCAATTGTATACTTAACTCCTCTCAAGTCTCAACTATCAACTCTCAAGAGTAAATACATTCAAGAAACTCAAATTCTTTTAGTAAGGAAAATATCGATGCTTGGATTCAGACGAACACTACTACGCCGAGCAATTCTCCATTTTCGTCCTAAAACCCTAATTCCCACCACACAACAGCTGTTGTTTCTGCAACACATAACAACCCATACAAGAACAGGCGGTTCATTAGGAAGAAGTTGTTCGAGCCCAAGTGTGTCAATATGGAGGAGAAAGAAAGAGATGGGCAAAGAAGGGTTGATTGTTGCTAAAGAGTTGAAGCGTTTACAATCAAACCCACTTCGTTTACAGCGTTTTATTCAATCCCATGTCTCTCGCCTTCTCAAGTCTGATCTTGTTTCTGTTTTGGCTGAGTTTCAGCGCCAAGATCAAGTCTTTCTCTCTATGAAGGCATCTGGTGGAATTAGTTGCGTGGTGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89072.p1 GENE.R_Transcript_89072~~R_Transcript_89072.p1 ORF type:5prime_partial len:160 (+),score=15.38 R_Transcript_89072:3-482(+)
PIVYLTPLKSQLSTLKSKYIQETQILLVRKISMLGFRRTLLRRAILHFRPKTLIPTTQQLLFLQHITTHTRTGGSLGRSCSSPSVSIWRRKKEMGKEGLIVAKELKRLQSNPLRLQRFIQSHVSRLLKSDLVSVLAEFQRQDQVFLSMKASGGISCVVF*

Click here to download the sequence:
Link to NCBI Protein BLAST