Transcript Information: R_Transcript_8918.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value6E-216
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.077460008847
Replicate 236.24273057725
Replicate 350.548613529319
Condition 2: 8 Hour
Replicate 162.296193505359
Replicate 268.978974725636
Replicate 378.122479631206
Condition 3: 24 Hour
Replicate 184.692405461919
Replicate 261.996319602312
Replicate 392.964738634808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8918.p1 GENE.R_Transcript_8918~~R_Transcript_8918.p1 ORF type:complete len:566 (+),score=153.70,Frigida|PF07899.7|7.7e+02,Frigida|PF07899.7|1.1e-109 R_Transcript_8918:224-1921(+)
ATGGAAGACACTCAGTCTGTTTCTGTACTCATAGACTCTGCAACATCCAAAATACAACAACTTCAAAAAGCATTTACTGAGCTTGAAAGCCACCGAGCTGTTACCCTAAATCTGAAATGGAAAGAGCTGGAAGCTCATTTCCATGGGCTAGAGAAGTCACTGAAGAGGCGCTTTCATGAGTTGGAAGATCAGGAGAAGGAATATGAAAGCAAGACCATGGAGGCACAAGATGTAATTGAGAAGCATAAAGCCGCTGTTGTGGCTAAGGAGCAAGCTTCGCTGGAAAAGCTTCAAGAGAAGAGGGATGCTGCCATGTTAGCTATTGCAACTGCTAGAGAGAAGCAACGGAGGGTATCAAGCGAATTTTATACTGTAGTCACCAGTGTGGGTCAAGTTGGAACAGCCATGGAAGAGACTCCTACCAATTCTATGATATCTGATATTACTTCAGAGGACATAAGTGGCTCGGTCGAATATGGAAGTCCTGAAGTGCAGTCAGCTGAAAGTGGAAATGGTGAGGCGATGTCTTATCCTGAGCTTGTCAAACTATGTGAAGAGATGGATGCAGAGGGTCTTCACAACTTCATATCTGACAACCGCAAGAACCTTGCATCAATTAGGGAGGAAATGCCACAGGCTCTGAAGGCTGCTGCTGACCCTGCTCATCTGGTTTTGGATTCACTGACCGACTTTTACAGGGGTGATGTCACAAACTTGGATGCAAAGAAGGATTCCAGTCTTTTGGGTCTGCGTCGAACCTGCATCATGTTGATGGAGTGCCTTAGCAGTTTGTTTATAAGCTTGGATGCAGTCTCTGTTTCTAATATAATATCTGAAGTTGTCAAGGTGCGAGCAAAATCTATTGCTGAAGCATGGAAGCCAAAGCTCAATGAACTTGACATGGAAGCTGGCAATGGAAACTCCTTGGAGGCTCATGCATTCTTACAGCTTCTGGCGACTTTTTCAATCGTATCTGATTTTGATGCAGAAGAACTGAAGAAACTGGTGCCTTTGGTGTCACGCCGTCGCCAGGCTGCTGAACTCTGCCGTTCTCTCGGGTTATCTGACAAAATGCCAGGTGTAATTGAAGTACTGATACACAGTGGCAGACAAATCGATGCTATCAATCTGGCTTTCCAGTTTGGACTGACTGAGCAGTTTCCACCTGTGCCTCTGCTGCAAAACTATCTGAAGGAAGCAAAGAAAGTTTCTTCACCAGCTAAGCCCGGGAACACATCACCACCATCTCCCAATGTTCAGAATAACGAGGTGAATGAACGAGAGCTCAGTGCACTGAAGGCTGTGATAAAATGTGTTGAAGAGCACAAGCTTGAAGAGCAGTTCCCTGTGGATTCCCTGGCAAAGCGTGTCCTCCAGCTTGAGAAGGCCAAAGCAGACAAGAAACGGGCAACGGAAGTGCCTAAGCCTCAATCCAAGAGGCCCCGGGCCACCAACACAGGTTATGGGCCTCGCTTCACTAACATTGCTCCCAACAACTCCCCCTATGCTGCTAGGCCAACAGATAGGTATCCTCCTCAGTATGTGTTTGACAACAGAACCTATGTTTACACTCCTGGACCTACTGACAATCACTGTGCTCCTGTCTTGGGTGCCCCTGCATATGCCTTCCCCCCTCCTGCGCATGCTAATTACTATGCGAATGGCTACCAGTACCAGGCCCCAGCCTACCTTCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8918.p1 GENE.R_Transcript_8918~~R_Transcript_8918.p1 ORF type:complete len:566 (+),score=153.70,Frigida|PF07899.7|7.7e+02,Frigida|PF07899.7|1.1e-109 R_Transcript_8918:224-1921(+)
MEDTQSVSVLIDSATSKIQQLQKAFTELESHRAVTLNLKWKELEAHFHGLEKSLKRRFHELEDQEKEYESKTMEAQDVIEKHKAAVVAKEQASLEKLQEKRDAAMLAIATAREKQRRVSSEFYTVVTSVGQVGTAMEETPTNSMISDITSEDISGSVEYGSPEVQSAESGNGEAMSYPELVKLCEEMDAEGLHNFISDNRKNLASIREEMPQALKAAADPAHLVLDSLTDFYRGDVTNLDAKKDSSLLGLRRTCIMLMECLSSLFISLDAVSVSNIISEVVKVRAKSIAEAWKPKLNELDMEAGNGNSLEAHAFLQLLATFSIVSDFDAEELKKLVPLVSRRRQAAELCRSLGLSDKMPGVIEVLIHSGRQIDAINLAFQFGLTEQFPPVPLLQNYLKEAKKVSSPAKPGNTSPPSPNVQNNEVNERELSALKAVIKCVEEHKLEEQFPVDSLAKRVLQLEKAKADKKRATEVPKPQSKRPRATNTGYGPRFTNIAPNNSPYAARPTDRYPPQYVFDNRTYVYTPGPTDNHCAPVLGAPAYAFPPPAHANYYANGYQYQAPAYLH*

Click here to download the sequence:
Link to NCBI Protein BLAST