Transcript Information: R_Transcript_89192.p1


Annotated TAIR IDAT4G15180.1
Annotated Gene NameSET domain protein 2
Annotated Gene Symbol(s)SDG2, ATXR3
Annotation TypeOrtholog
Chromosome Positionchr4:8651999-8662178 | Forward length=2335
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.492103891162
Replicate 28.6733362703424
Replicate 312.670796494412
Condition 2: 8 Hour
Replicate 112.717543861721
Replicate 214.79229657439
Replicate 320.073456846972
Condition 3: 24 Hour
Replicate 118.249494949242
Replicate 214.093668978431
Replicate 316.605094843749


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89192.p1 GENE.R_Transcript_89192~~R_Transcript_89192.p1 ORF type:complete len:2399 (+),score=538.36,SET|PF00856.24|8.6e+03,SET|PF00856.24|4.4e+03,SET|PF00856.24|2.2e-09,DUF4339|PF14237.2|0.094,DUF4339|PF14237.2|0.00054 R_Transcript_89192:445-7641(+)
ATGGGCGATGGCGGTGTTGCATGCGTGTCTTTGCAGCCAATTATGGACAAGTTTCCAGGTTCTGAAACATTATGTGGGGCCAACACTAGCACGAGCAATGGAAAATTGGAGACTACTAAGACTGTCAAGAGAACTACCACTAAGAGGATGAAACTTAAAAGAGATGCTTTCGTCAAGAAGGAAGAGCCAGAGAAGACTGAGTTAGCTTCAGAGAAAGTGACGGAAGTAGAGAATGGTGAAGTTGTTGCTGTTGTTGGTGGCGGTGGTGATAAGTTGCAGCCGAAGGAAGAGATAGAAGAAGGTGAATTAGGGACTTTGAAATCACCTAAAAGGGAGGTGGAGAATGGTGAGGTAACACCTGATAAATCTGTCAAGAGTGAGGTTGATAAGGGCGAGTTTGTTAGTAGTGATAGTACTAATAATAATAGGTGGAATAAAGAAGAGCCTGAGAAAGGTGAATTTTTTCCATCAAGATGGCGGAAAACTGATGCAGAGAGAGTTGAATTCTGCTCAGGAAGGTTGAGAAACGAAGTCTCTCCGAGGAGGGAACGGACTCCAGAGAAGAGCAGGAAAGGTGAGTATGAGAAGATTGAATTTGGGTCATGGAGGGGGTCCAAAGATGAAGTTGAGAAAGGGGAGTTTATTCCAGATAGATGGCATAAGGGAGATGCGTTTAGGGATGAGTATAGTTACTCGAAAGGGCGAAGAATTGATTCAAGCAGAGAAAGAGACCGTAGATACGAGCATGACTGGACACCACCTTCTGTAAAGTATTCAGGTGAGGATATTTCTCCTGGAAGAGAGTTCAGCAGAAGTGGGAATCGTCATTCAAAAAGGGTTGCAAGGTGGGAAACTAACCACGAGAGGAGCTACCCGAAATTGAGCTCAAAAATTACAGATGAGGTGGGGTCTTACAAAAATGATTACAGTCACAGCAGCAGGAGCCAAATGAGAGAATACCCATCATCTAGTGCTCGATTGAAGCGGCACGGCACCAACTCAGACAGCAGTGATCGTAAACAGTATGATGATCATGGAGAATATGTAAGTTCCAAAAGCAGGAGGCTTTCTGGAGATAGCTGCAGGAATGTACATTCTGAGCATTACTCACGTCAGTCTGCTGAGAAATCATTCAGGAATTCAAACTCGTCGAGGGCGGTTTCTGATAAGCTCTCTGTGCGTCATTACGATTCTTCGTTAAACAGAGCAGTTTATGACAGGCACAGGCGCAGCCCTAGTTATTCTGAAAGGTCTCCACGTGAAAGAGCTCGTTATCATGGTCACAGGGATTGGACCCCTGCTCGACATGAGAGGTCCCCATGCTATCGTAGTCATCTCCATGATAATAGAAATCGGAGTCCCAGTTATGTGGAACGGTCCCCACAGGACAGGTCAAGGCCACATGATCGGAGGGATCGGTCTCCAAGTTACTTGGATCGGTCCCCACATGACAGGAGTCGGGCAGGTAATATCCGTCCGACAAGTCAGAGTGAAGTAAGTGATACCAAGCTCAGTGATAGGCTACAGGAAGAGAAGCCTACTGAGAAGAATGCCAGTGGGAAGGATTCTTTAGCATCAGCTAAAGACCTATCAAATGAAAGCGATATGCAAAACGGATCAGCTGAGAAAAGCATTTGTCATGAGGTTCAAGCTGAGGATCGGTTTGGAAGCCCTTGTTTGGATAGCAAGGAACAGCCCTCGTTGACAAATGGAGTTGTTGAAGAGTTGCCTTCAATGGAAGAAGACATGGATATATGTGATACTCCACCACATGTCCCATCCGTGCCTAGTGTGAACCCAGGGAAGTGGTACTACCTTGATCACCTGGGAGAGGAGCGTGGCCCTTCAAGATTATGTGACTTGAAGGTACTCGTGGAAGAAGGAATTCTCATGTCAGATCACTTGGTTAAGCACTTAGACAGTGACAGGTGGGTGACTGTTGAACATGCAGCTTCACCAATGGTGACGGCTAATTATACAACCATTTTTTCGGACTCTGTTACTCAGCTGGTGAATCCTCCTGAGGCTCCTGGTAATGTACTGGTAGATTTTGGAGATGCAGAACAATCTGAGGATCAGATTGGTATGGTGAGTTCCGATGCTTTTGCACAGGTGGGGTCTGGTCTAGATGATCATTTAGCCACAGAGGATCTTACCATTGATGAAAGAGTTGGTGCCCTCTTAGAAGGCGTCACTGTTGTTCCTGGAAAAGAACTTGAGATAGTAGGAGAAGTCTTGCAAATGACATTTGACCAGTCAGAGTGGGAGAGATTTGGTAGCTTGGAAGGTTTTACAGAGCTTCACCCATGCAGTGAAGAGATTGCTGAACAGAGTCGGGAGGAGGATGTTCCACATCCAGAGCCTGCAACTAGGGACTCTGGTGAATTGATACCTATCACCACCGTTGATAAGGAATGTGGTTATCTTGTGAGTGAATTTAATGAATGGTTCTCTGCTCGGTGGTCATGCAAAGGTGGGGACTGGCAAAGGAATGAAGAGGCTGTTCCAGATAAATTCTTCAAAAGAAAGCTTGTGCTTAATGATGGTTACCCTCTCTGCCAGATGCCGAAATCTGGATATGAGGACCCTAGATGGCAGAGAAAAGATGACTTGTACTTCCCTTGTCAGAGCAAAAGGCTTGATCTTCCACCTTGGGCTTTTTGCTGGCCTGATGAGAGAAATGATGCCAACAAATCAAGTCAATCTAAACCTGTTGTTGCAAGGGGAGTCAAAGGAACCATGTTACCTGTCATTAGAATTAATGCATGTGTTGTTAAGGATCATGGTTCATTTGTCTCTGACTCTAGGCTGAAACTGAGAACTAAAGAAAAGCACTCTTCAAAGGGCTCTAAGCATTACTCTTTGTCTAGTGACATAAAAAGATCTTCTGGAGATGATGGTCTTCATTCCAGAAGCTTCAAGGAGCAAGGCTCTGTAGGATTATGGAAGTCTGGTGTGATCAATAAGCCAAAAGACCGGCTTTGCACAGTGATTGATTTGCAGCTGCATTTGGGTGACTGGTATTACGTTGACGGTACTGGGCATGAACATGGGCCATTTTCATGCTCAGTATTGCAGTCATTAGTGGAGGAAGGTTCGCTGAAGAAGCTAAGCAGTGTGTTCCGCAAAGTTGACAAAGTTTGGGTCCCAGTCACCTCTGTGATTAAGGCCTCTCAGGAAAGTGTCAAACTCAGTGAAGAAAATCCTATACCTGCTGGTGATATGTCTGGATTACGTCAGTCTGTGGGTGATGACAGTTTGGTACCTGGTTCCTTCCATAGTTTACATCCCCAATTCATTGGTTATACACGTGGGAAGCTTCACGAGTTGGTTATGAAATCCTTTAAGAGTCGGGAATTTGCTGCTGCTATAAATGAAGTATTAGATCCATGGATCAATTCTAGACAACCAAAGAAGGAAATAGAGAAGCTTCATTATAGTAAACCTATGAATAAGGGTTCCCTTTATCTTCAAAATTCACCTGCAGAAAATGGAGTTTCCTTCCTGCATGATGATGACATACATGCTAGGAAAAGATGTCGGACATCAGTTGACAAAGTTGAAGAAGGGTATGAAATGATTGAAGGCTTTCCACGTCTTTGTTGTAGTGAACCCTCATTTGAGGATTTATGTGGTGAGGCAACTTTCTGCAAAGAAGAAAATGAATGTGCTGAAAATCAGGCTGGGAGCTGGGGTCTGCTGGATGGCCATATTTTAGCACGGATCTTTCATTTTCTCAGGACGGATGTCAAATCTCTTGTCTTTGCTGCTTTGACTTGTAGACATTGGAGAGCTGCTGTTGGCTTTTACAAAAATGTGAGTGTATGGGTTGACTTGTCAACTATTGGCACCAATTGCACTGACTCTGTCGTTGGGAGTATTTTGAATAGTTACAATAAACAGATGATAAAGGTCTTGATTTTGGATGGTTGTACCAACATATCATCTTCTATGCTTGAGGAAATTCTGAACTCTTTCTCTTTCATATCCTCTGTTGATATAAGAGGTTGCAGCCAGTTTGAGGAGTTGATCATCAAATTTCCTAATGTAAACTGGGTCAGAGGCCGTGGTTCACCAGGAGTGAGAATTATTGAGGAGTCAAATGCAAAGACAAGGAGTTTAAGCCGTGGGAGTTACATGGAAGAGTCCAGTGGGCTGAAAGATTATTTTGATATGGTGGACAGACGAGGGGCAGCTAACCAGGCATTCCGGCAGAACTTATATAAACGTACAAAACTCTCTGATGCGCGAAAGTCCGCATCAGTTCTTGCCCGTGAAGCACGTATGAGGCATTGGGCAATGAAAAAGGCTGGAAGTGGGTATAGGAAAATGGAGGAATTTCTTGTGCTCAGCTTGAAGGATATAATGAAGGGGAAGACATCTGATTATTTTGTTCCCAAGGTTGCTGAGATTGAAAACCGAATTAAGAGTGGATATTATGCTCGTCGTGGGTTAAACTCTGCAAAGCAAGATATCATCAAAATGTGCAGGGAGGCAATCAAAATGAGAAATCGGGGTGATGGAGGTGATTTGGAGCATATGATTGCGCTGTTTATTAAACTCGGAACATGTCTAGATGAGAGCTTCAGAACAGCTATTGACAGAGATGAAATGATGAGGAAACTGAGAGACGAGGCCAGTGGATCCTCTGTGAATAAGAAATACAGTAAATCAATGACGGAAAGGAAATATACGAGCCGGGCCAATGGGACATCTTTTGTTAATGGTGGTTCTGATTATATTGAATGGTCATCTGACAAAGAGATTAGGAGGAACTTATCTAAAATGCACAGGAAGCTGGATTCAGAAAGTGAATCCTCTGATGAGTTTGAGTTGTCCTCTGATGATACTGAAAGTGATACTGAAAATGACTCGAGCGCTGAAAGTGATTCTGATATCCGGTCAGAAGGTGGCGCTTCAGAGTCAAAAGATGGATACTTACCGGCAGATGAATCTTTTGACATGATCCCTGATGACCGTGAATGGGGCGCTCGCATGACAAAGGCCAGCCTTGTGCCTCCCGTGACAAGGAAGTATGAAGTTATTGACCAGTATGTTATTGTAGCTGATGAAGTGGAAGTGCAACGCAAGATGCTAGTATCGTTGCCTGATGATTACGAGGATAAAGTCAAAGCTCAGAAAAATGGCTCTGAGGAGGTGGACATGGAGATTCCTGAAGTTAAAGAGTATAAACCTAGGAAACAGTTGGGAGAAGAGGTAATAGAACAAGAGGTATATGGCATTGATCCTTACACGCACAATCTTCTTCTTGATTCTATGCCCGAAGATGTGGATTGGTCACCTGCAGAAAAGCATAACTTTATCGAGGATGTGCTACTTCGGGTACTGAATAAACAAGTTAGACACTACACAGGCACTGGAAGTACACCAATGACATACCCTTTAAAGCCTGTTATTGAAGAAGTTCTAGAAACTGCTAAGCAGGAGCCTGATATGAAAATATTAAAGCTGTGTGATGCTCTTCTTATGGCCATTGGCAGGCGCCCTGAGGACAATTATGTTGCTTATAGAAAGGGGCTCGGTGTTGTCTGTAACAAACATGGTGGTTTTACTGGAGATGATTTTGTTGTTGAGTTCCTGGGAGAGGTTTACCCTGCATGGAAATGGTTTGAAAAGCAAGATGGGATTAGATCCTTGCAGAAGAACAGTAAAGAGCCAGCTCCTGAATTCTACAACATATACTTGGAGAGGCCTAAGGGTGATGCTGATGGCTATGATTTAGTAGTTGTTGATGCAATGCATAAGGCAAATTATGCAAGTCGAATTTGTCACTCTTGTCGTCCTAATTGTGAAGCAAAAGTTACTGCTGTAGATGGTCAATATCAGATTGGAATATATTCTGTACGTCCTATAGCATTTGGTGAGGAAATCACCTTCGACTACAATTCAGTTACTGAGAGTAAGGAAGAATATGAAGCGTCTGTTTGTTTGTGTGGGAGTCAAGTTTGCCGTGGAAGCTATTTGAACCTAACAGGGGAAGGTGCATTTCAGAAGGTGCTGAAGGAGTGGCATGGACTGTTGGATAAACATCGTTTGCTGCTCGAGGCCTGTGAGCTGAATTGGGTTTCTGAAGAGGATTATATTGATCTGGGAAGGGCTGGTTTGGGAAGTTGTTTGCTTGGGGGGTTGCCTGATTGGCTGATTGCATATTCAGCTCGACTGGTAAGGTTCATAAATTTTGAGAGAACTAAGCTCCCTGCTGAGATCTTAAGACATAACGTGGAAGAGAAGAGGAAATATTATGCAGAAATATCCCTTGAAATGGAAAAAAGTGATGCTGAACTCCAAGCAGAAGGAGTCTACAATCAGAGACTTCAAAATCTAGCACTCACGTTGGATAAGGTTAGGTATGTCCTGAGATGCGTTTATGGAGACCCAAAGAAAGCTCCCCCACCATTGCAGAAGCTTAGTCCTGAAGAGATGGTGTCAATCTTGTGGACTGGTGATGGCTCTCTTATCAGTGAACTTCTTGAATGCATAGCTCCACATGTTGATGATCGCATTCTACAGGATCTTAGATCCAAGATTCGTATTCATGATCCGTCAAGTTCAGGCAATATTGAGAAAGAACTTAGGAAATCCTTAATATGGTTACGAGACGAAGTCCGTAATCTTCCTTGTACATACAAGAGTCGACATGATGCTGCTGCTGATCTGATCCACATATATGCTTACACAAAATTTTTCTTCAAAATAAGGGAATACAAGACCGTGACTTCAGCTCCTGTTTACATAAGCCCTCTTGATCTTGGCCCTAAATGTGCTAATAACTTGAATGGAGTCACAGAATTCTGCAAAACTTATGGTGAAAATTATTGTTTGGGGCAGCTGATTTATTGGCATAACCAGGGCAATGCTGACCCAGATCGTGTGCTGATCCGAGCAAGTAGAGGGTGCTTGTCATTACCTGATGTTGGTTCATTTTATGCCAAGGCACAAAAACCAACAAGACAGCGTATTTATGGTCCAAGGACCGTTAGATTTATGCTGGCTAGAATGGAAAAACAGCCCCAAAGGCCGTGGCCCAAGGATAGAATATGGTCTTTCAAGAGTTCTCCTAAAATTTTTGGTAGTCCTATGCTAGATGCTATAATGAATAATTCTCCACTGGAGCGGGAAATGGTGATTTGGTTGAAGAACAGACCTGCCATCTTCCAAGCTATGTGGGATCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89192.p1 GENE.R_Transcript_89192~~R_Transcript_89192.p1 ORF type:complete len:2399 (+),score=538.36,SET|PF00856.24|8.6e+03,SET|PF00856.24|4.4e+03,SET|PF00856.24|2.2e-09,DUF4339|PF14237.2|0.094,DUF4339|PF14237.2|0.00054 R_Transcript_89192:445-7641(+)
MGDGGVACVSLQPIMDKFPGSETLCGANTSTSNGKLETTKTVKRTTTKRMKLKRDAFVKKEEPEKTELASEKVTEVENGEVVAVVGGGGDKLQPKEEIEEGELGTLKSPKREVENGEVTPDKSVKSEVDKGEFVSSDSTNNNRWNKEEPEKGEFFPSRWRKTDAERVEFCSGRLRNEVSPRRERTPEKSRKGEYEKIEFGSWRGSKDEVEKGEFIPDRWHKGDAFRDEYSYSKGRRIDSSRERDRRYEHDWTPPSVKYSGEDISPGREFSRSGNRHSKRVARWETNHERSYPKLSSKITDEVGSYKNDYSHSSRSQMREYPSSSARLKRHGTNSDSSDRKQYDDHGEYVSSKSRRLSGDSCRNVHSEHYSRQSAEKSFRNSNSSRAVSDKLSVRHYDSSLNRAVYDRHRRSPSYSERSPRERARYHGHRDWTPARHERSPCYRSHLHDNRNRSPSYVERSPQDRSRPHDRRDRSPSYLDRSPHDRSRAGNIRPTSQSEVSDTKLSDRLQEEKPTEKNASGKDSLASAKDLSNESDMQNGSAEKSICHEVQAEDRFGSPCLDSKEQPSLTNGVVEELPSMEEDMDICDTPPHVPSVPSVNPGKWYYLDHLGEERGPSRLCDLKVLVEEGILMSDHLVKHLDSDRWVTVEHAASPMVTANYTTIFSDSVTQLVNPPEAPGNVLVDFGDAEQSEDQIGMVSSDAFAQVGSGLDDHLATEDLTIDERVGALLEGVTVVPGKELEIVGEVLQMTFDQSEWERFGSLEGFTELHPCSEEIAEQSREEDVPHPEPATRDSGELIPITTVDKECGYLVSEFNEWFSARWSCKGGDWQRNEEAVPDKFFKRKLVLNDGYPLCQMPKSGYEDPRWQRKDDLYFPCQSKRLDLPPWAFCWPDERNDANKSSQSKPVVARGVKGTMLPVIRINACVVKDHGSFVSDSRLKLRTKEKHSSKGSKHYSLSSDIKRSSGDDGLHSRSFKEQGSVGLWKSGVINKPKDRLCTVIDLQLHLGDWYYVDGTGHEHGPFSCSVLQSLVEEGSLKKLSSVFRKVDKVWVPVTSVIKASQESVKLSEENPIPAGDMSGLRQSVGDDSLVPGSFHSLHPQFIGYTRGKLHELVMKSFKSREFAAAINEVLDPWINSRQPKKEIEKLHYSKPMNKGSLYLQNSPAENGVSFLHDDDIHARKRCRTSVDKVEEGYEMIEGFPRLCCSEPSFEDLCGEATFCKEENECAENQAGSWGLLDGHILARIFHFLRTDVKSLVFAALTCRHWRAAVGFYKNVSVWVDLSTIGTNCTDSVVGSILNSYNKQMIKVLILDGCTNISSSMLEEILNSFSFISSVDIRGCSQFEELIIKFPNVNWVRGRGSPGVRIIEESNAKTRSLSRGSYMEESSGLKDYFDMVDRRGAANQAFRQNLYKRTKLSDARKSASVLAREARMRHWAMKKAGSGYRKMEEFLVLSLKDIMKGKTSDYFVPKVAEIENRIKSGYYARRGLNSAKQDIIKMCREAIKMRNRGDGGDLEHMIALFIKLGTCLDESFRTAIDRDEMMRKLRDEASGSSVNKKYSKSMTERKYTSRANGTSFVNGGSDYIEWSSDKEIRRNLSKMHRKLDSESESSDEFELSSDDTESDTENDSSAESDSDIRSEGGASESKDGYLPADESFDMIPDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEVEVQRKMLVSLPDDYEDKVKAQKNGSEEVDMEIPEVKEYKPRKQLGEEVIEQEVYGIDPYTHNLLLDSMPEDVDWSPAEKHNFIEDVLLRVLNKQVRHYTGTGSTPMTYPLKPVIEEVLETAKQEPDMKILKLCDALLMAIGRRPEDNYVAYRKGLGVVCNKHGGFTGDDFVVEFLGEVYPAWKWFEKQDGIRSLQKNSKEPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRPIAFGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGLLDKHRLLLEACELNWVSEEDYIDLGRAGLGSCLLGGLPDWLIAYSARLVRFINFERTKLPAEILRHNVEEKRKYYAEISLEMEKSDAELQAEGVYNQRLQNLALTLDKVRYVLRCVYGDPKKAPPPLQKLSPEEMVSILWTGDGSLISELLECIAPHVDDRILQDLRSKIRIHDPSSSGNIEKELRKSLIWLRDEVRNLPCTYKSRHDAAADLIHIYAYTKFFFKIREYKTVTSAPVYISPLDLGPKCANNLNGVTEFCKTYGENYCLGQLIYWHNQGNADPDRVLIRASRGCLSLPDVGSFYAKAQKPTRQRIYGPRTVRFMLARMEKQPQRPWPKDRIWSFKSSPKIFGSPMLDAIMNNSPLEREMVIWLKNRPAIFQAMWDR*

Click here to download the sequence:
Link to NCBI Protein BLAST