Transcript Information: R_Transcript_89240.p1


Annotated TAIR IDAT5G55000.2
Annotated Gene Namepotassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein
Annotated Gene Symbol(s)FIP2
Annotation TypeOrtholog
Chromosome Positionchr5:22318644-22321599 | Forward length=298
E-Value4.7E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2168640636479
Replicate 22.4701529901527
Replicate 35.0304992368021
Condition 2: 8 Hour
Replicate 13.7448969919316
Replicate 21.8414843869212
Replicate 31.5660213084255
Condition 3: 24 Hour
Replicate 10
Replicate 21.9892978607187
Replicate 30.85834136027048


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89240.p1 GENE.R_Transcript_89240~~R_Transcript_89240.p1 ORF type:complete len:255 (+),score=40.74,Pentapeptide|PF00805.18|1.8e-08,Pentapeptide|PF00805.18|3.4e-08,Pentapeptide|PF00805.18|5.5e-08,Pentapeptide|PF00805.18|2.1e-12,Pentapeptide|PF00805.18|7.5e-12,Pentapeptide_4|PF13599.2|0.0012,Pentapeptide_4|PF13599.2|2.2e-09,Pentapeptide_4|PF13599.2|2.1e-10,Pentapeptide_3|PF13576.2|10,Pentapeptide_3|PF13576.2|0.3,Pentapeptide_3|PF13576.2|0.00074,Pentapeptide_3|PF13576.2|8.3e-05,Pentapeptide_3|PF13576.2|0.00045,Pentapeptide_3|PF13576.2|0.0032 R_Transcript_89240:161-925(+)
ATGTGTTCCGATTCTTCTTCCATCGTTCGTCTCAACATTGGAGGAAAGAAATATAGCACGACGGTAGATACATTGACGCAACGGGAACCTGAATCAATGCTCGCTGCTATGTTTAGTGGCCGTCACACTCTTTGCCAAGACCCTCTCAAGGGATTGATAGAGGGAATCAATGTGGCCTTAAATAAGAGAAAAGAGGAAGAAGACTTGACTAGTGAATTAACTCGTCGCGACATTATCAAGTGCATACAATCAGAGAGAGTTAAATTTCGAGGAGTCAATCTGTCTGGCCTCGACCTTTCCAAATTGGACCTTTCATATGTGGACTTCAGCCATGCTTGTCTTAAGGGTGTCTTCTTCTCACGGGCATACCTTCAATGTGCAAAATTTCGGGATGTGGATGGTGAGGGTTCAATTTTCCATAATGCGACTCTGCGTGAATGTGAATTTACTGGGGCAAATCTTCGTGGAGCTTTACTTGCTGGGTCTAATCTGCAAAGTGCAAACCTACAAGATGCTTGTTTGATTGATTGTAGCTTCTGTACAGCAGATCTGCGTTCTGCCCACTTGCAGGGTGCAGATCTTACTAATGCCAACTTAGAGGGGGCAAACCTGGAAGGTGCTAACTTGAAGGGGGCAAAGCTGACTAATGCCAACCTAAAAGGGGCCAACCTTCAAAGAGCTTACTTGCGACATGTCAATCTTCGGGAAACACATTTGGAAGGTGCAAAGCTTGATGGCGCCAACTTGCTTGGAGCAATCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89240.p1 GENE.R_Transcript_89240~~R_Transcript_89240.p1 ORF type:complete len:255 (+),score=40.74,Pentapeptide|PF00805.18|1.8e-08,Pentapeptide|PF00805.18|3.4e-08,Pentapeptide|PF00805.18|5.5e-08,Pentapeptide|PF00805.18|2.1e-12,Pentapeptide|PF00805.18|7.5e-12,Pentapeptide_4|PF13599.2|0.0012,Pentapeptide_4|PF13599.2|2.2e-09,Pentapeptide_4|PF13599.2|2.1e-10,Pentapeptide_3|PF13576.2|10,Pentapeptide_3|PF13576.2|0.3,Pentapeptide_3|PF13576.2|0.00074,Pentapeptide_3|PF13576.2|8.3e-05,Pentapeptide_3|PF13576.2|0.00045,Pentapeptide_3|PF13576.2|0.0032 R_Transcript_89240:161-925(+)
MCSDSSSIVRLNIGGKKYSTTVDTLTQREPESMLAAMFSGRHTLCQDPLKGLIEGINVALNKRKEEEDLTSELTRRDIIKCIQSERVKFRGVNLSGLDLSKLDLSYVDFSHACLKGVFFSRAYLQCAKFRDVDGEGSIFHNATLRECEFTGANLRGALLAGSNLQSANLQDACLIDCSFCTADLRSAHLQGADLTNANLEGANLEGANLKGAKLTNANLKGANLQRAYLRHVNLRETHLEGAKLDGANLLGAIR*

Click here to download the sequence:
Link to NCBI Protein BLAST