Transcript Information: R_Transcript_89242.p1


Annotated TAIR IDAT5G55000.2
Annotated Gene Namepotassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein
Annotated Gene Symbol(s)FIP2
Annotation TypeOrtholog
Chromosome Positionchr5:22318644-22321599 | Forward length=298
E-Value2.4E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61665408630807
Replicate 20.35466723676179
Replicate 30.61910101611223
Condition 2: 8 Hour
Replicate 10.57905761699566
Replicate 21.0576092762723
Replicate 30.36793805311595
Condition 3: 24 Hour
Replicate 10.69804143597749
Replicate 20.96864312695103
Replicate 31.7746787583971


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89242.p1 GENE.R_Transcript_89242~~R_Transcript_89242.p1 ORF type:complete len:296 (+),score=37.65,Pentapeptide|PF00805.18|2.3e-08,Pentapeptide|PF00805.18|4.3e-08,Pentapeptide|PF00805.18|8e-08,Pentapeptide|PF00805.18|0.046,BTB_2|PF02214.18|1.3e-18,Pentapeptide_4|PF13599.2|0.00091,Pentapeptide_4|PF13599.2|1.1e-08,Pentapeptide_4|PF13599.2|2.5e-06,Pentapeptide_3|PF13576.2|0.26,Pentapeptide_3|PF13576.2|0.00092,Pentapeptide_3|PF13576.2|0.0001 R_Transcript_89242:161-1048(+)
ATGTGTTCCGATTCTTCTTCCATCGTTCGTCTCAACATTGGAGGAAAGAAATATAGCACGACGGTAGATACATTGACGCAACGGGAACCTGAATCAATGCTCGCTGCTATGTTTAGTGGCCGTCACACTCTTTGCCAAGACCCTCTCAAGGGTTATGTGTTTGTTGACAGAGATGGCAAACATTTTCGGCATATCTTGAATTGGTTGAGGGATGGAGTTGTGCCCACACTAAAGGACTCGGAATACGCTGAGCTGTTGCGTGAAGCAGAATATTATCAACTACTTGGATTGATAGAGGGAATCAATGTGGCCTTAAATAAGAGAAAAGAGGAAGAAGACTTGACTAGTGAATTAACTCGTCGCGACATTATCAAGTGCATACAATCAGAGAGAGTTAAATTTCGAGGAGTCAATCTGTCTGGCCTCGACCTTTCCAAATTGGACCTTTCATATGTGGACTTCAGCCATGCTTGTCTTAAGGGTGTCTTCTTCTCACGGGCATACCTTCAATGTGCAAAATTTCGGGATGTGGATGGTGAGGGTTCAATTTTCCATAATGCGACTCTGCGTGAATGTGAATTTACTGGGGCAAATCTTCGTGGAGCTTTACTTGCTGGGTCTAATCTGCAAAGTGCAAACCTACAAGATGCTTGTTTGATTGATTGTAGCTTCTGTACAGCAGATCTGCGTTCTGCCCACTTGCAGGTCATTTGGGCAGTGTATGTATGTTGCAAGCAAATTCCCTTTGATGAATTGAGCCTGAAAGGTTTTTCAAGCAACTTCGTCTCAAAATTGGATTGGAACAGAAGTCACGTACAATTGGTACCATGTGGGCTTTTTTTCAAGTTGACCGAGAACTTATCTAAGTTCTATGAAAGCATGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89242.p1 GENE.R_Transcript_89242~~R_Transcript_89242.p1 ORF type:complete len:296 (+),score=37.65,Pentapeptide|PF00805.18|2.3e-08,Pentapeptide|PF00805.18|4.3e-08,Pentapeptide|PF00805.18|8e-08,Pentapeptide|PF00805.18|0.046,BTB_2|PF02214.18|1.3e-18,Pentapeptide_4|PF13599.2|0.00091,Pentapeptide_4|PF13599.2|1.1e-08,Pentapeptide_4|PF13599.2|2.5e-06,Pentapeptide_3|PF13576.2|0.26,Pentapeptide_3|PF13576.2|0.00092,Pentapeptide_3|PF13576.2|0.0001 R_Transcript_89242:161-1048(+)
MCSDSSSIVRLNIGGKKYSTTVDTLTQREPESMLAAMFSGRHTLCQDPLKGYVFVDRDGKHFRHILNWLRDGVVPTLKDSEYAELLREAEYYQLLGLIEGINVALNKRKEEEDLTSELTRRDIIKCIQSERVKFRGVNLSGLDLSKLDLSYVDFSHACLKGVFFSRAYLQCAKFRDVDGEGSIFHNATLRECEFTGANLRGALLAGSNLQSANLQDACLIDCSFCTADLRSAHLQVIWAVYVCCKQIPFDELSLKGFSSNFVSKLDWNRSHVQLVPCGLFFKLTENLSKFYESML*

Click here to download the sequence:
Link to NCBI Protein BLAST