Transcript Information: R_Transcript_89243.p1


Annotated TAIR IDAT5G55000.2
Annotated Gene Namepotassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein
Annotated Gene Symbol(s)FIP2
Annotation TypeOrtholog
Chromosome Positionchr5:22318644-22321599 | Forward length=298
E-Value1.3E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.507191106492
Replicate 214.347471951137
Replicate 38.8572718705123
Condition 2: 8 Hour
Replicate 18.1619549824151
Replicate 215.876226107242
Replicate 317.062513983164
Condition 3: 24 Hour
Replicate 114.539944577546
Replicate 211.395217093465
Replicate 313.643335921499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89243.p1 GENE.R_Transcript_89243~~R_Transcript_89243.p1 ORF type:complete len:300 (+),score=48.81,Pentapeptide|PF00805.18|2.3e-08,Pentapeptide|PF00805.18|4.4e-08,Pentapeptide|PF00805.18|6.9e-08,Pentapeptide|PF00805.18|5.5e-12,Pentapeptide|PF00805.18|9.5e-12,Pentapeptide_4|PF13599.2|0.0017,Pentapeptide_4|PF13599.2|3e-09,Pentapeptide_4|PF13599.2|2.9e-10,BTB_2|PF02214.18|1.3e-18,Pentapeptide_3|PF13576.2|0.28,Pentapeptide_3|PF13576.2|0.00093,Pentapeptide_3|PF13576.2|0.0001,Pentapeptide_3|PF13576.2|0.00023 R_Transcript_89243:161-1060(+)
ATGTGTTCCGATTCTTCTTCCATCGTTCGTCTCAACATTGGAGGAAAGAAATATAGCACGACGGTAGATACATTGACGCAACGGGAACCTGAATCAATGCTCGCTGCTATGTTTAGTGGCCGTCACACTCTTTGCCAAGACCCTCTCAAGGGTTATGTGTTTGTTGACAGAGATGGCAAACATTTTCGGCATATCTTGAATTGGTTGAGGGATGGAGTTGTGCCCACACTAAAGGACTCGGAATACGCTGAGCTGTTGCGTGAAGCAGAATATTATCAACTACTTGGATTGATAGAGGGAATCAATGTGGCCTTAAATAAGAGAAAAGAGGAAGAAGACTTGACTAGTGAATTAACTCGTCGCGACATTATCAAGTGCATACAATCAGAGAGAGTTAAATTTCGAGGAGTCAATCTGTCTGGCCTCGACCTTTCCAAATTGGACCTTTCATATGTGGACTTCAGCCATGCTTGTCTTAAGGGTGTCTTCTTCTCACGGGCATACCTTCAATGTGCAAAATTTCGGGATGTGGATGGTGAGGGTTCAATTTTCCATAATGCGACTCTGCGTGAATGTGAATTTACTGGGGCAAATCTTCGTGGAGCTTTACTTGCTGGGTCTAATCTGCAAAGTGCAAACCTACAAGATGCTTGTTTGATTGATTGTAGCTTCTGTACAGCAGATCTGCGTTCTGCCCACTTGCAGGGTGCAGATCTTACTAATGCCAACTTAGAGGGGGCAAACCTGGAAGGTGCTAACTTGAAGGGGGCAAAGCTGACTAATGCCAACCTAAAAGGGGCCAACCTTCAAAGAGCTTACTTGCGACATGTCAATCTTCGGGAAACACATTTGGAAGGTGCAAAGCTTGATGGCGCCAACTTGCTTGGAGCAATCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89243.p1 GENE.R_Transcript_89243~~R_Transcript_89243.p1 ORF type:complete len:300 (+),score=48.81,Pentapeptide|PF00805.18|2.3e-08,Pentapeptide|PF00805.18|4.4e-08,Pentapeptide|PF00805.18|6.9e-08,Pentapeptide|PF00805.18|5.5e-12,Pentapeptide|PF00805.18|9.5e-12,Pentapeptide_4|PF13599.2|0.0017,Pentapeptide_4|PF13599.2|3e-09,Pentapeptide_4|PF13599.2|2.9e-10,BTB_2|PF02214.18|1.3e-18,Pentapeptide_3|PF13576.2|0.28,Pentapeptide_3|PF13576.2|0.00093,Pentapeptide_3|PF13576.2|0.0001,Pentapeptide_3|PF13576.2|0.00023 R_Transcript_89243:161-1060(+)
MCSDSSSIVRLNIGGKKYSTTVDTLTQREPESMLAAMFSGRHTLCQDPLKGYVFVDRDGKHFRHILNWLRDGVVPTLKDSEYAELLREAEYYQLLGLIEGINVALNKRKEEEDLTSELTRRDIIKCIQSERVKFRGVNLSGLDLSKLDLSYVDFSHACLKGVFFSRAYLQCAKFRDVDGEGSIFHNATLRECEFTGANLRGALLAGSNLQSANLQDACLIDCSFCTADLRSAHLQGADLTNANLEGANLEGANLKGAKLTNANLKGANLQRAYLRHVNLRETHLEGAKLDGANLLGAIR*

Click here to download the sequence:
Link to NCBI Protein BLAST