Transcript Information: R_Transcript_89278.p1


Annotated TAIR IDAT5G17210.1
Annotated Gene NameProtein of unknown function (DUF1218)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5656519-5657970 | Forward length=209
E-Value4E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1109.0591486189
Replicate 271.324115987023
Replicate 386.33192561364
Condition 2: 8 Hour
Replicate 172.350193914473
Replicate 2108.88288695532
Replicate 3107.99752248512
Condition 3: 24 Hour
Replicate 147.300004840998
Replicate 230.367542392051
Replicate 343.445443976505


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89278.p1 GENE.R_Transcript_89278~~R_Transcript_89278.p1 ORF type:complete len:199 (+),score=34.07,DUF1218|PF06749.8|56,DUF1218|PF06749.8|1.4e-14 R_Transcript_89278:338-934(+)
ATGGCTCGAGGAAATTCTGTAGCGGTTATTCTAATTGCTGCTTTTCTTGGCATGGTTGCAGTTGGCTTGAGTTTTGCTGCTTATGCTACTAGGATTAAGGTTAGTGATGTGAGTTCAGTAAATGGGAATTGCTCATATACAAACAAGCCAGCATTTGCGTTGGGAATAGTGGCAGCAGTGTTTCTTCTAATGGAGCAGGTTGTGGTTAGTGCTGGTACTGACTGTTTCTGCTGTTGTGGAAGCCGTTGCCATTCAAGCTGTGCTTATATCTCCTCCATTATCCTCTTCATCTCGTCCTGGGTGACATCGATCATAGCATTTCTGGGATTAATATCATCAGCCATCCTGAACAACAGTGGCTTGCTAACAAATGCTACTACTGGCAAGTATGGTGATCTTACTGAGACACTCGGGGACGGTTGTTATGTGGGAAAGGACAATTACTTCCTTGGGGCTGCTATTTGGTGCATAATCAGCATTGTTCTTGGCCTCCTTTCTTTGATTATAGTCAGGACTAGTGACAATAGAAACAACCCAAGGCCTGCAAACTTTGCTCATGAGGAAGGTGTTGCTCTCGGACAACCTGCTAAGTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89278.p1 GENE.R_Transcript_89278~~R_Transcript_89278.p1 ORF type:complete len:199 (+),score=34.07,DUF1218|PF06749.8|56,DUF1218|PF06749.8|1.4e-14 R_Transcript_89278:338-934(+)
MARGNSVAVILIAAFLGMVAVGLSFAAYATRIKVSDVSSVNGNCSYTNKPAFALGIVAAVFLLMEQVVVSAGTDCFCCCGSRCHSSCAYISSIILFISSWVTSIIAFLGLISSAILNNSGLLTNATTGKYGDLTETLGDGCYVGKDNYFLGAAIWCIISIVLGLLSLIIVRTSDNRNNPRPANFAHEEGVALGQPAKY*

Click here to download the sequence:
Link to NCBI Protein BLAST