Transcript Information: R_Transcript_89298.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value6.1E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.281766328488
Replicate 234.087367242122
Replicate 342.639650103681
Condition 2: 8 Hour
Replicate 151.626823683951
Replicate 260.078031934752
Replicate 356.259058218007
Condition 3: 24 Hour
Replicate 142.043213236277
Replicate 236.404463469989
Replicate 345.621360371485


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89298.p1 GENE.R_Transcript_89298~~R_Transcript_89298.p1 ORF type:complete len:332 (+),score=49.10,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|7.4e-76 R_Transcript_89298:54-1049(+)
ATGGATTTGGAGAGTGTGGAATGTGTATCTTCAACATCAACTGATATGGATGAGGATGAAATCATTCATCACCACCATCACCACAACCAAACCCATCATCAGTTCTCATCTTCAAAACCCAATAATATTAATATTAATATTAATGGGGGGATTGTCAATTCCTCATCTATTCATCCATCTACTGGGGTCCATGAGCTTCTTGAATGCCCTGTTTGTACCAATTCTATGTACCCTCCTATTCATCAGTGTCGTAACGGACATACACTTTGCTCAACCTGTAAAACACGTGTGCAAAACCGATGTCCAACTTGCAGACAAGAACTTGGAGATATAAGATGTCTAGCATTGGAAAAAGTTGCTGAATCACTTGAGCTTCCTTGCAAATACTATTCTCTTGGTTGTCCAGAGATATTCCCCTACTACAGCAAATTAAAGCATGAGGCCATATGTAACTTCAGGCCTTACAATTGTCCGTATGCTGGATCAGAGTGTTCTGTCACCGGGGATATCCCATACCTCGTGACTCATTTGAGGGATGAGCACAAGGTTGACATGCATTCCGGATGCACATTCAACCATCGTTATGTGAAGTCTAACCCACGTGAGGTGGAAAATGCTACTTGGATGCTAACTGTGTTCCACTGTTTTGGCCAGTATTTCTGCCTCCATTTTGAAGCTTTCCAGCTTGGTATGGCCCCTGTATATATGGCGTTTCTTCGGTTTATGGGTGATGAGATGGAGGCTAGGAATTATAGCTACAGCCTTGAAGTTGGGGGCTATGGCCGGAAAATAATTTGGGAGGGAACACCTCGAAGCATTAGAGACAGCCACAGAAAGGTGAGGGACAGCCATGATGGTCTCATCATACAGCGCAACATGGCGCTCTTTTTCTCTGGAGGCGACCGAAAAGAACTGAAGTTGCGGGTTACAGGGCGTATATGGAAGGAGCAACAGAATCCTGATGGTGGAGCTTGCATTCCCAATCTCTGCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89298.p1 GENE.R_Transcript_89298~~R_Transcript_89298.p1 ORF type:complete len:332 (+),score=49.10,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|7.4e-76 R_Transcript_89298:54-1049(+)
MDLESVECVSSTSTDMDEDEIIHHHHHHNQTHHQFSSSKPNNINININGGIVNSSSIHPSTGVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSVTGDIPYLVTHLRDEHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARNYSYSLEVGGYGRKIIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDGGACIPNLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST