Transcript Information: R_Transcript_89512.p1


Annotated TAIR IDAT3G22110.1
Annotated Gene Name20S proteasome alpha subunit C1
Annotated Gene Symbol(s)PAC1
Annotation TypeOrtholog
Chromosome Positionchr3:7792819-7793571 | Reverse length=250
E-Value1.3E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 184.745890146908
Replicate 282.672932889174
Replicate 380.582630472179
Condition 2: 8 Hour
Replicate 182.858417991124
Replicate 282.056450327922
Replicate 392.54080057358
Condition 3: 24 Hour
Replicate 196.545778609363
Replicate 2112.44243595107
Replicate 396.149559874585


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89512.p1 GENE.R_Transcript_89512~~R_Transcript_89512.p1 ORF type:5prime_partial len:112 (-),score=23.67,Proteasome|PF00227.22|4.5e-19 R_Transcript_89512:162-497(-)
GATAAGAATTTCGGGTTCCAGCTTTATATGAGTGACCCTAGTGGTAACTATGGTGGGTGGAAAGCGACTGCTATTGGAGCGAACAACCAAGCTGCACAATCTATGCTGAAGCAGGATTATAAGGATGATATCACTAGGGAAGATGCGGTCCAGCTTGCGTTGAAGGTTCTCAGTAAGACAATGGACAGCACCAGTCTTACTTCTGAAAAGCTTGAATTGGCCGAGGTTTACCAAATGCCTTCTGGGAAAGTTAAGTACCATGTGCACTCTCCGGATTCCTTGAACAAGTTGTTGGTTAAGTCTGGTCTCGCTCAACCTGCTGCAGAAACCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89512.p1 GENE.R_Transcript_89512~~R_Transcript_89512.p1 ORF type:5prime_partial len:112 (-),score=23.67,Proteasome|PF00227.22|4.5e-19 R_Transcript_89512:162-497(-)
DKNFGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDITREDAVQLALKVLSKTMDSTSLTSEKLELAEVYQMPSGKVKYHVHSPDSLNKLLVKSGLAQPAAETS*

Click here to download the sequence:
Link to NCBI Protein BLAST