Transcript Information: R_Transcript_89515.p1


Annotated TAIR IDAT3G22110.1
Annotated Gene Name20S proteasome alpha subunit C1
Annotated Gene Symbol(s)PAC1
Annotation TypeOrtholog
Chromosome Positionchr3:7792819-7793571 | Reverse length=250
E-Value1.6E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1130.82500700215
Replicate 2125.64320010072
Replicate 3130.32199716058
Condition 2: 8 Hour
Replicate 1111.69846758803
Replicate 2116.70420403169
Replicate 3122.21602369902
Condition 3: 24 Hour
Replicate 1139.11882387784
Replicate 2146.91789986074
Replicate 3126.00690546839


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89515.p1 GENE.R_Transcript_89515~~R_Transcript_89515.p1 ORF type:complete len:251 (+),score=56.19,Proteasome|PF00227.22|1.7e-62,Proteasome_A_N|PF10584.5|9.5e-14 R_Transcript_89515:254-1006(+)
ATGTCTCGGAGATATGATAGCCGCACTACAATCTTCTCCCCAGAAGGTCGGCTCTACCAGGTAGAATATGCCATGGAGGCCATTGGAAATGCTGGAAGTGCCATCGGGATTTTGGCAAAAGATGGTGTTGTTTTAGTTGGAGAGAAGAAGGTCACTTCCAAGCTCCTTCAAACTTCTACCTCGACCGAGAAGATGTACAAGATTGATGATCACGTGGCCTGTGCTGTAGCCGGTATAATGTCTGATGCTAACATCCTTATCAACACAGCTAGGGTCCAGGCTCAGCGTTACACTTTCGCTTACCAAGAACCAATGCCTGTTGAGCAGCTGGTTCAGTCCCTTTGTGACACCAAGCAAGGTTACACCCAGTTTGGTGGGCTTCGTCCCTTCGGTGTTTCCTTTCTCTTTGCTGGGTGGGATAAGAATTTCGGATTCCAACTTTACATGAGTGACCCAAGTGGAAACTATGGTGGGTGGAAAGCCACTGCAATTGGTGCGAACAACCAAGCCGCACAATCGATGCTTAAGCAGGACTACAAAGATGATATCACCAGGGAGGATGCTGTCCAGCTCGCTTTGAAGGTCCTCAGTAAGACAATGGATAGTACAAGTCTTACTTCTGAGAAGCTCGAGTTGGCTGAAGTTTTTCAATTGCCTTCTGGAAAAGTCAAGTACCATGTGCACTCTCCAGAATCCTTGAACAAGTTGTTGGCTAAGTCTGGTCTGACTCAACCTGCTGCAGAAGCCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89515.p1 GENE.R_Transcript_89515~~R_Transcript_89515.p1 ORF type:complete len:251 (+),score=56.19,Proteasome|PF00227.22|1.7e-62,Proteasome_A_N|PF10584.5|9.5e-14 R_Transcript_89515:254-1006(+)
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDITREDAVQLALKVLSKTMDSTSLTSEKLELAEVFQLPSGKVKYHVHSPESLNKLLAKSGLTQPAAEAS*

Click here to download the sequence:
Link to NCBI Protein BLAST