Transcript Information: R_Transcript_89551.p1


Annotated TAIR IDAT4G38920.1
Annotated Gene Namevacuolar-type H(+)-ATPase C3
Annotated Gene Symbol(s)AVA-P3, ATVHA-C3, VHA-C3
Annotation TypeOrtholog
Chromosome Positionchr4:18147330-18148853 | Forward length=164
E-Value6.3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1503.32266584719
Replicate 2454.37502817067
Replicate 3515.33301286673
Condition 2: 8 Hour
Replicate 1435.17393511032
Replicate 2473.59544354655
Replicate 3550.09162484897
Condition 3: 24 Hour
Replicate 1634.70776030126
Replicate 2662.45017122836
Replicate 3571.17734745808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89551.p1 GENE.R_Transcript_89551~~R_Transcript_89551.p1 ORF type:complete len:167 (+),score=18.17,ATP-synt_C|PF00137.17|4.7e-13,ATP-synt_C|PF00137.17|6.3e-23 R_Transcript_89551:195-695(+)
ATGTCTACCGCAGTCTTCAACGGCGATGAAACGGCACCGTTCTTCGGCTTCCTCGGGGCCGCTTCCGCCCTCGTCTTCTCCTGTATGGGAGCGGCGTACGGAACAGCGAAGAGTGGAGTAGGAGTGGCGTCGATGGGAGTGATGAGGCCAGAATTGGTGATGAAATCGATCGTACCAGTTGTTATGGCTGGTGTTTTGGGTATTTATGGTTTGATTATTGCTGTCATTATTAGTACTGGTATAAACCCCAAGGCTAAGTCCTATTACCTCTTTGATGGATATGCTCATCTCTCTTCTGGTCTCGCTTGTGGTCTTGCTGGTTTGTCTGCTGGTATGGCCATCGGTATCGTTGGTGACGCCGGTGTCAGGGCAAACGCTCAGCAGCCAAAGCTTTTCGTTGGAATGATCCTCATTCTCATTTTTGCTGAGGCTTTGGCTTTGTATGGTCTCATTGTCGGTATCATCCTCTCTTCCCGTGCTGGCCAGTCAAGAGCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89551.p1 GENE.R_Transcript_89551~~R_Transcript_89551.p1 ORF type:complete len:167 (+),score=18.17,ATP-synt_C|PF00137.17|4.7e-13,ATP-synt_C|PF00137.17|6.3e-23 R_Transcript_89551:195-695(+)
MSTAVFNGDETAPFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD*

Click here to download the sequence:
Link to NCBI Protein BLAST