Transcript Information: R_Transcript_89625.p1


Annotated TAIR IDAT1G66730.1
Annotated Gene NameDNA LIGASE 6
Annotated Gene Symbol(s)AtLIG6, LIG6
Annotation TypeHomolog
Chromosome Positionchr1:24884991-24891823 | Forward length=1396
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23845910985975
Replicate 20.074808671316977
Replicate 30.10882060615749
Condition 2: 8 Hour
Replicate 10.058161199399632
Replicate 20
Replicate 30.15090412629775
Condition 3: 24 Hour
Replicate 10.10906321723375
Replicate 20.13096947084666
Replicate 30.051989797356051


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89625.p1 GENE.R_Transcript_89625~~R_Transcript_89625.p1 ORF type:complete len:842 (+),score=135.80,DRMBL|PF07522.10|5.8e-19 R_Transcript_89625:796-3321(+)
ATGTCCACCAAAACCCTAACCCTACAAACCTCCGATCTCTATCACCAATCTCAAAACCCCCTCTCTCTATCTCCAATCCCCTCCGATTTCCCTCTCTCCAAACTCATCCCCAAAACCCGCTTTATTATCGACGGTTTTCGAAATTCCGGCGAATTTTCAATTTCCTACTTTCTTTCTCACTTTCACTCCGATCACTACACCGGTCTCACTCCTAACTGGTCTAAAGGCATCGTCTTTTGCTCCGAAACCACTGGTCGCCTTGTTGTCGACATTCTTAGGGTTTCGCCGTTGCTCGTTTTCCGATTGCCGGTTAATCAGACCGTGGTTATCGACGATTGTGAGGTAACGTTAATTGACGCTAACCATTGTCCTGGTGCTGTTCTGTTCTTGTTTAAAGTTCCTGTTGGTGATGGCAAATTTGAGCGCTTTGTTCATACTGGTGATTTTAGGTATTGTAGTGCTATGAAATTAGAACCTGTGTTGAGTCAATTTGTTGGTTGTGATGCTGTTTTTCTTGACACTACTTATTGTCACCCGAAATTCATGTTCCCATCACTAGAGGAGTCGATTGATTACGTGGTCAGTGTGGTGGATAGGATAGGTGCTGAGAATAGGAATGTAGATAAGAGTGTTTTGTTTCTTGTTGCTACTTATGTCGTTGGAAAAGAGAGGATTTTGCTGGAAATTGCGCGTCGGTGTGGGTGTAAGATATTTGTGGATGGTAGGAAAATGGAGGTTTTGCGGGTGTTAGGGTATGGAGATGAGGAGGGTGTGTTTACCGAAGAGGAATCTGGTAGTAATGTTCATGTTGTTGGGTGGAATGTGTTGGGGGAGACTTGGCTGTATTTTCGGCCTAATTTTTTGAAGATGAAGGATATTATGGTTGAAAAAGGATATTCTAAGGTTGTTGGGATTGTTCCTACTGGTTGGACTTACGTAGTAAAGAGAAACAAGTTTGTGGTTAGAACTAAGGATACACTTGAGATTCATCTTGTGCCTTACAGTGAGCATTCAAATTATGATGAACTCAGAGAGTATGTGAAGTTTTTGAAGCCGAAGCAGGTGATTCCTACCGTGGGTTCTCAAGGAGATAACATAGACAGCAATCATGCTGCAAAGATGCGAAAGCATTTTGCTGGGCTGGTTGACGAAATGGCCAATAAGAAGGAGTTTTTAATGGGTTTTCACCGTGTATCCCAGGGTAAGGGTCAGAGCAAGGTAGATGATCCTGTGATCAAGTTAGATGAGATTTTGGAATCGCCAAAAGAAGAGCCAGGTTTGAGCGATGTGAATTCTGATAAAGAAGCTGACTCGCATACCATGATAGATCCTTCTACTTCTTTGGACGAGACTGGTTCACTTCATTTGGCCTTATTGAGTGATAAGGAAAAGGAGGAGATTGTGCAAGAGCTACGTGATTGTCTGCCCATCTGGGTCTCTGATGATCAAGTGCTGGATCTCATCCGAATCTCTGGCAGAAACATTGTTGACTCTGTATCTTATTTTTATGAACATGAAACTGAGTTTCATGAACAGAGCGCAACCTCTCTATCTTTATCCCAGTCAAAATCAGAAAGTAGTTGCACCGTAGTTCCAAGGACTGGCTCTGATGAGGGCAGTCTTCCTACAACCGTAAAGTTGGCCGATCAGAAACTCAAATTCTCCCCACTGAAGCCTTCAGTTCGGAGCAGTGTTTCTCCTGGAAAAAGGAGGAGAAATACTGAAAATAAGCATACTAAGAAGGCCAAAGTTAGTTCAAATCTTCAACCTAGTGGCAAACAATCTACTATAACAAAGTTTTTTAGTAAACATAAAAATGTTTGTCAGGGGAACAATTCTGAAACTGTTCCTGGTAAATGCACTGCTGACAAGAGCTTGTCTGCAGTCCATTCTACTAAACCTTATAAAGAAGAATTGGAGAAATTTATTCAGATCACTAATGGCAGTGAATCAACAAGAAGTTATGCTGCTGAACTCGTAGAAAAGGCCCAAGGAAATATCGAATTTGCACTGGATATGTATTACAATAATTCTGAGGTACCCATTTGTGATGACAGTAGAGTAGATATTTGCAGCAAATCCATACTTGTTGAAGGCGTTGAACCCAGCTGCTCTAACCTAGGGAAAGAAACCTCTTCTGAACCAGGTAAGAGGGTCCATAAATCAAAAGAAGAAGTATTGGCTGAGAATGTAGCTGTTAGCTATATATCATTACCATTGGAAAAGTATTCTCCTATAGATCATGCCTGTTGGAAGCAAGGTCAGCCTGCTCCGTATATGCATATGGCACGGACGTTTGACCTCGTTGAAGGTGAAAAGGGCAAACTGAAAGCTACCTCTATGCTTCGCAATATGTTTAGAAGGTTTTTCTGCTATGCGGCATATCATTCATCATTTCCTTTCTTATGTTCTAATTTGGGAGCTGATATATTAGTGTTGTTCCATGTGGCACTTGTTTCTTTTTTGCATTCCTCTAATCTTTGGAAAGACTTTCAAAAAAAAAACTTCCTGGAGCTTAAATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89625.p1 GENE.R_Transcript_89625~~R_Transcript_89625.p1 ORF type:complete len:842 (+),score=135.80,DRMBL|PF07522.10|5.8e-19 R_Transcript_89625:796-3321(+)
MSTKTLTLQTSDLYHQSQNPLSLSPIPSDFPLSKLIPKTRFIIDGFRNSGEFSISYFLSHFHSDHYTGLTPNWSKGIVFCSETTGRLVVDILRVSPLLVFRLPVNQTVVIDDCEVTLIDANHCPGAVLFLFKVPVGDGKFERFVHTGDFRYCSAMKLEPVLSQFVGCDAVFLDTTYCHPKFMFPSLEESIDYVVSVVDRIGAENRNVDKSVLFLVATYVVGKERILLEIARRCGCKIFVDGRKMEVLRVLGYGDEEGVFTEEESGSNVHVVGWNVLGETWLYFRPNFLKMKDIMVEKGYSKVVGIVPTGWTYVVKRNKFVVRTKDTLEIHLVPYSEHSNYDELREYVKFLKPKQVIPTVGSQGDNIDSNHAAKMRKHFAGLVDEMANKKEFLMGFHRVSQGKGQSKVDDPVIKLDEILESPKEEPGLSDVNSDKEADSHTMIDPSTSLDETGSLHLALLSDKEKEEIVQELRDCLPIWVSDDQVLDLIRISGRNIVDSVSYFYEHETEFHEQSATSLSLSQSKSESSCTVVPRTGSDEGSLPTTVKLADQKLKFSPLKPSVRSSVSPGKRRRNTENKHTKKAKVSSNLQPSGKQSTITKFFSKHKNVCQGNNSETVPGKCTADKSLSAVHSTKPYKEELEKFIQITNGSESTRSYAAELVEKAQGNIEFALDMYYNNSEVPICDDSRVDICSKSILVEGVEPSCSNLGKETSSEPGKRVHKSKEEVLAENVAVSYISLPLEKYSPIDHACWKQGQPAPYMHMARTFDLVEGEKGKLKATSMLRNMFRRFFCYAAYHSSFPFLCSNLGADILVLFHVALVSFLHSSNLWKDFQKKNFLELKL*

Click here to download the sequence:
Link to NCBI Protein BLAST