Transcript Information: R_Transcript_89733.p1


Annotated TAIR IDAT3G19210.1
Annotated Gene NameHomolog of RAD54
Annotated Gene Symbol(s)ATRAD54, CHR25, RAD54
Annotation TypeOrtholog
Chromosome Positionchr3:6652799-6658876 | Reverse length=910
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2904303943623
Replicate 22.3803292450563
Replicate 33.7728744276016
Condition 2: 8 Hour
Replicate 13.1163828114676
Replicate 22.7502688895576
Replicate 35.3969494678798
Condition 3: 24 Hour
Replicate 15.8438054761429
Replicate 24.6233483877574
Replicate 36.2502857234242


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89733.p1 GENE.R_Transcript_89733~~R_Transcript_89733.p1 ORF type:complete len:935 (+),score=164.49,SNF2_N|PF00176.19|5.1e-58,Helicase_C|PF00271.27|1.5e-14,ResIII|PF04851.11|5.6e-08,ResIII|PF04851.11|4.5e+02 R_Transcript_89733:82-2805(+)
ATGGAAGACGAAGAAGAAGAACCACTCTCATCTTCCGAAACTTCCGATTCAAGTGTCGAATTTGTAGCTGAAAGCGACGATGATGGTCTCGCAAACGAAGATGAGGAAAACTTCAAAGATTATGACGCCCTTGACGACGATGCACCCTCCCAAGAAGAAACAAAGTCTCAAAATGTCGCTGCCCTAATCAGGGGAAACCTTGTGGTGAAACGACAATCACTGCTACCCCGAGTACTTTCGGTGTCGGATGGAGCAGCAGTGGCTAGAAAACCCTTCAAACCGCCATTTTCGGGAAATAGTAATGAACAGCTTCTTAAACGAAGGCTTGCAGCTCGAAAGAGATTTGTCCCTTGGGGCTCCACGAGCCCTGTGGCGGTTGCTCTATCAATTCCTGCGAAACTCCCAACAGTTGCTGAGGAGAAAGATGAGGTGCAGCAGGACGAATTTACTTTGCCACCTGGCGTTGAGCCGTTGGTGTTATGGCAACCTGAAGAAATGGAGGATGGATGTGCTAATTTGACTCCTGTTGTTGTTGATCCCTTGCTTGTTCGCTTCCTTCGACCGCATCAGAGAGAAGGCGTCCAGTTTATGTTTGACTGTGTCTCAGGATTACATAGTGGTGACAATATCTATGGATGCATTTTGGCTGATGATATGGGTTTAGGGAAGACCCTACAGTCAATCACATTGCTTTATACTCTTCTCTGCCAAGGATTTGACGGAAAACCAATGGTTAAAAAGGCAATTGTAGTTACTCCTACCAGTCTTGTCAGTAATTGGGAGGCAGAAATTAAAAAGTGGGTTGGGGAGAGAGTTCAGCTCATTGCCCTGTGTGAAAGTAGCCGAGATGAAGTTGTTTCTGGAATTGACAGTTTCATAAATCCACGCAGCACAATACAGGTATTGATTGTTTCTTATGAAACATTTCGGATGCATTCTCCAAGGTTCAGCGAAAGTGGATCCTGTGATCTTGTCATATGTGATGAGGCCCACCGGCTTAAAAATGACCAGACAATGACAAACAAGGCATTGGCTTCACTCCTATGCAAGCGTCGCATCTTGCTATCAGGTACACCAATGCAAAATGACCTTGAAGAGTTTTACGCCATGGTTAACTTCACCAATCCTGGTATCCTTGGTGATGCTGTGCATTTTCGACGGTATTATGAGACGCCAATCCTCTATGGAAGAGAACCCACAGCCACTGAGGAAGAGAAAAGGCTCGGTATTGAACGCTCAGAGGAATTGAGCGCCAAAGTGAATCAGTTTATATTGAGGAGGACCAATGCATTGTTATCTAATCATCTACCACCGAAGATAGTTGAAGTTGTTTGTTGCAAACTAACTCCTCTGCAGTCTGAACTGTACAATCATTTTTTACAGTCAAAAAATGTAAAAAGGGTAATTAATGAAGAAGCAAAACACTCAAAGATATTAGCATATATAACAGCTCTCAAGAAGCTCTGCAATCACCCGAAGCTCATATATGATAGCATAAAGAGCGGAAATTCAGGAATATCAGGCTTTGAGAACTGCATGCGTTTTTTTCCTGCAGAAGTTTTTGCTGGAAGATCTGGTGGATGGACTGGTGGTGATGGCCTTTGGGTGGAGTTATCTGGGAAAATGCATGTATTAGCACGTTTGCTGGCTCAATTACGTCAAAAAACAGATGATAGAATAGTCCTGGTCTCGAACTACACCCAGACACTTGACCTATTTTCTCAACTTTGTCGTGAGAGAAGATATCCATACTTGAGACTAGATGGGTCCACGTCAATTAGCAAACGACAAAAGTTGGTCAACCGTTTTAATGATCCAATAAAGGATGAGTTTGCTTTTCTCTTAAGCAGCAAAGCGGGTGGCTGTGGCCTAAATCTGATTGGTGGAAATCGCCTGGTCTTGTTTGATCCTGACTGGAATCCTGCCAATGATAAACAAGCTGCTGCAAGAGTTTGGAGAGATGGGCAAAAGAAAAGAGTATACATCTACAGATTTCTTAGTACTGGAACCATTGAAGAGAAGGTGTACCAGCGTCAGATGTCAAAAGAAGGGCTCCAGAAAGTTATTCAACAGGAGCAAACCAATTGTGACAAGGGTAACTTTTTCTCAATGGAAGATCTAAGAGATCTTTTCAAATATCGGACCAATGTGAGATCGGAGATCCATGAAAAGATGAGTTGCAGTCGATGTGAAAGCAACAATATCCAAGAGGGTGAAATGATTACAGACACTATCGAAGTCAACAGATTTGAATCAGAAAGTGATGAATCAGGTCAAAGTGATGTTGATATCGGCGGGTTTGCAGAATTTTCTGGGTGCCTACATAAGTTAAAAAGCTCAGAGAGACAGGTGGGAACTCCTCTTGAAGAGGATTTGCTCAACTGGGGTCATCATTTCTCTGCCAATTCAGTGCCTGATGTTCTTTTTCAGGCTTCAGCAGGTGATGAGGTTACATTCGTGTTTACGAACCAAATTGGAGGAAAGCGTGTCCCTATTGAATCAATGCGTCCAAAGATGCAAGGTGTAGAGGCTAGTAATGGGAGTCTCATGAGTAACTTGTCAGTAGCCTCCTCTGAACCTGCACAATGTGCACCTCTGAGATCAATAAGAAGTTCATTAAAAGAAGTAACGAATTTATCATGGAGGTCTAAGCTGCCTCTCAACAGACAGCTACCTCTGAAAAGACCTATTCATTCTATACAAGTTCACGATGAAGCAGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89733.p1 GENE.R_Transcript_89733~~R_Transcript_89733.p1 ORF type:complete len:935 (+),score=164.49,SNF2_N|PF00176.19|5.1e-58,Helicase_C|PF00271.27|1.5e-14,ResIII|PF04851.11|5.6e-08,ResIII|PF04851.11|4.5e+02 R_Transcript_89733:82-2805(+)
MEDEEEEPLSSSETSDSSVEFVAESDDDGLANEDEENFKDYDALDDDAPSQEETKSQNVAALIRGNLVVKRQSLLPRVLSVSDGAAVARKPFKPPFSGNSNEQLLKRRLAARKRFVPWGSTSPVAVALSIPAKLPTVAEEKDEVQQDEFTLPPGVEPLVLWQPEEMEDGCANLTPVVVDPLLVRFLRPHQREGVQFMFDCVSGLHSGDNIYGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKKAIVVTPTSLVSNWEAEIKKWVGERVQLIALCESSRDEVVSGIDSFINPRSTIQVLIVSYETFRMHSPRFSESGSCDLVICDEAHRLKNDQTMTNKALASLLCKRRILLSGTPMQNDLEEFYAMVNFTNPGILGDAVHFRRYYETPILYGREPTATEEEKRLGIERSEELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSELYNHFLQSKNVKRVINEEAKHSKILAYITALKKLCNHPKLIYDSIKSGNSGISGFENCMRFFPAEVFAGRSGGWTGGDGLWVELSGKMHVLARLLAQLRQKTDDRIVLVSNYTQTLDLFSQLCRERRYPYLRLDGSTSISKRQKLVNRFNDPIKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTNCDKGNFFSMEDLRDLFKYRTNVRSEIHEKMSCSRCESNNIQEGEMITDTIEVNRFESESDESGQSDVDIGGFAEFSGCLHKLKSSERQVGTPLEEDLLNWGHHFSANSVPDVLFQASAGDEVTFVFTNQIGGKRVPIESMRPKMQGVEASNGSLMSNLSVASSEPAQCAPLRSIRSSLKEVTNLSWRSKLPLNRQLPLKRPIHSIQVHDEAG*

Click here to download the sequence:
Link to NCBI Protein BLAST