Transcript Information: R_Transcript_89851.p1


Annotated TAIR IDAT1G10640.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3515478-3517807 | Reverse length=532
E-Value4.6E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4209921632435
Replicate 23.4336055192066
Replicate 34.5641244082559
Condition 2: 8 Hour
Replicate 13.7281110164039
Replicate 23.8248876833607
Replicate 35.1520548941324
Condition 3: 24 Hour
Replicate 19.0622923267253
Replicate 25.5967292297518
Replicate 38.0227488983928


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89851.p1 GENE.R_Transcript_89851~~R_Transcript_89851.p1 ORF type:complete len:532 (+),score=57.24,Glyco_hydro_28|PF00295.13|2.9e-08,Glyco_hydro_28|PF00295.13|5.3e-71,Pectate_lyase_3|PF12708.3|9.7e-05 R_Transcript_89851:168-1763(+)
ATGAAGACATCACACGTAAGAAGTTTCACATTAATGCTTCTCACTGTTGTACTTCTTTGGTCTACAAGTTTTGATACGTGCATTGCTAGAAGAGGAAGGCATTGGAGGCACAACAGACCTCTCTCAGCCTCACAACTTAAGAAGAAAGGAAACAATAAGCACCATAGTAGTAAACCCAAGACAAAGGGTTCATACCACAAAGCTCCAGGTCATGCACCAGTTGCATCACCCCCACCAACAAAGAAAGCTCCGTGCCCTAAAGGATCGTCTCCTAAAACCAAGCCGCCTTCCAGTGCGGCACCAATTGAAGAAATTCCACCTCCTGAACCACAAGGTAGCAGTGTTTTCAGTGTGATTGATTATGGAGCTAAGGGTGATGGAAGATCAGATGATACTAAGGCATTCCAAGATGCATGGGCAGCCGCTTGTAAAGTGGAGTCATCAACGATGCTAATTCCATCAGGATATCAATTTCTTGTGGGACCAATTTCATTTTCTGGTCCGTACTGCCAGAAAAATATTGTATTCCAGCTTGACGGGACGATCATCGCTCCAACAAGCCCCAATACATGGGGTCATGGTCTATTGTGGTGGCTAGATTTCACAAAATTGGTAGGGACCACAATACAAGGAAAGGGAGTCATTGATGGAAGTGGCTCGGTCTGGTGGCAAGCTGATCCGTATGGGGCTCCTGTGGATGATGAAACACAAATGATTGTCCCATTAAATGGCAGAGTGCTAAGACGCCCCCCAATACCAGAAACAAGTGAGCTGAGTGTGAAAATGCCAAGTATCAAGCCAACGGCACTGAGGTTCTACAGCAGTATTAACGTGACAGTCACAGGCATAACAATTCAAAACAGTCCTCAATGTCATCTAAAGTTCGACAATTGCAATGGAGTCTTGGTGTATTCGATGAGTGTTTCATCACCCAGCAACAGTCCCAATACTGATGGAATCCACCTACAGAACTCCAAAGATGTGCTAATTCACACTACAAATCTTGCTTGTGGTGATGACTGTATTTCCATACAAACTGGATGCTCAAACGTATACATCCACGGCGTGAATTGTGGACCTGGACATGGCATCAGTATTGGAAGTCTTGGAAAGGATAACACTAAGGCATGTGTCTCAAATGTCACTGTTCGAGACGTCAATATACAGGGAACAATGACTGGAGTCCGCATAAAGACATGGCAGGGTGGCTCAGGCTCTGTGCAAGGTATAACGTTTTCAAATATTCAAGTCAGTCAAGTTCAGCTTCCTATCGTAATAGACCAGTATTATTGCGATAAAAGAACGTGCAAGAATCAAACAACAGCTGTTTCGGTATCAGATATCACATATCAAAATATAAAAGGTTCATACACAGTGAAACCAGTACACCTGGCTTGTAGTGATAACCTTCCATGCACAGACATAACCTTAAACCGCATTCAACTACAGCCACAGCAAGGACCATATCGGATATCAGAACCCTATTGCTGGCAAAGTTTTGGAGAGCTTACGACTCCTATTGTCCCTCCTATTGGTTGTTTTCAGATAGGAAAGCCATTGAAGAACAAGGTTCAGTCGGATGCTGATTTATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89851.p1 GENE.R_Transcript_89851~~R_Transcript_89851.p1 ORF type:complete len:532 (+),score=57.24,Glyco_hydro_28|PF00295.13|2.9e-08,Glyco_hydro_28|PF00295.13|5.3e-71,Pectate_lyase_3|PF12708.3|9.7e-05 R_Transcript_89851:168-1763(+)
MKTSHVRSFTLMLLTVVLLWSTSFDTCIARRGRHWRHNRPLSASQLKKKGNNKHHSSKPKTKGSYHKAPGHAPVASPPPTKKAPCPKGSSPKTKPPSSAAPIEEIPPPEPQGSSVFSVIDYGAKGDGRSDDTKAFQDAWAAACKVESSTMLIPSGYQFLVGPISFSGPYCQKNIVFQLDGTIIAPTSPNTWGHGLLWWLDFTKLVGTTIQGKGVIDGSGSVWWQADPYGAPVDDETQMIVPLNGRVLRRPPIPETSELSVKMPSIKPTALRFYSSINVTVTGITIQNSPQCHLKFDNCNGVLVYSMSVSSPSNSPNTDGIHLQNSKDVLIHTTNLACGDDCISIQTGCSNVYIHGVNCGPGHGISIGSLGKDNTKACVSNVTVRDVNIQGTMTGVRIKTWQGGSGSVQGITFSNIQVSQVQLPIVIDQYYCDKRTCKNQTTAVSVSDITYQNIKGSYTVKPVHLACSDNLPCTDITLNRIQLQPQQGPYRISEPYCWQSFGELTTPIVPPIGCFQIGKPLKNKVQSDADLC*

Click here to download the sequence:
Link to NCBI Protein BLAST