Transcript Information: R_Transcript_89853.p2


Annotated TAIR IDAT1G60590.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22314426-22316867 | Reverse length=540
E-Value6.1E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86918861689137
Replicate 20.83318652445627
Replicate 31.0907970283882
Condition 2: 8 Hour
Replicate 11.3603258304025
Replicate 20.17746731619989
Replicate 31.5846644192401
Condition 3: 24 Hour
Replicate 13.2796867468149
Replicate 21.750417372268
Replicate 33.6479507811496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89853.p2 GENE.R_Transcript_89853~~R_Transcript_89853.p2 ORF type:5prime_partial len:126 (+),score=7.13,Glyco_hydro_28|PF00295.13|6.3e-34 R_Transcript_89853:2-379(+)
TGCAACGGAGTCTTGGTGTATTCAATGAGTGTTTCATCACCTGGCAACAGTCCCAATACTGATGGAATCCACCTACAGAACTCCAAAGATGTGCTAATTCACACTACAAATCTTGCTTGTGGTGATGACTGTATTTCCATACAAACTGGATGCTCAAACGTATACATCCACGGCGTGAATTGTGGACCTGGACATGGCATCAGTATTGGAAGTCTTGGAAAGGATAACACTAAGGCATGTGTCTCAAATGTCACTGTTCGAGACGTCAATATACAGGGAACAATGACTGGAGTCCGCATAAAGACATGGCAGGTAAATAACATTTCAGTTTCACATGCTATAGTTATACAGATCAGACAGACAACAACCATTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89853.p2 GENE.R_Transcript_89853~~R_Transcript_89853.p2 ORF type:5prime_partial len:126 (+),score=7.13,Glyco_hydro_28|PF00295.13|6.3e-34 R_Transcript_89853:2-379(+)
CNGVLVYSMSVSSPGNSPNTDGIHLQNSKDVLIHTTNLACGDDCISIQTGCSNVYIHGVNCGPGHGISIGSLGKDNTKACVSNVTVRDVNIQGTMTGVRIKTWQVNNISVSHAIVIQIRQTTTIR*

Click here to download the sequence:
Link to NCBI Protein BLAST