Transcript Information: R_Transcript_89855.p2


Annotated TAIR IDAT5G14650.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4724509-4726328 | Forward length=435
E-Value1.8E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67854873437616
Replicate 20.31221264559551
Replicate 30.42577579175004
Condition 2: 8 Hour
Replicate 10.091025520249982
Replicate 20
Replicate 30.13495621279098
Condition 3: 24 Hour
Replicate 10.68276006625142
Replicate 20.73790829001932
Replicate 30.97640318305862


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89855.p2 GENE.R_Transcript_89855~~R_Transcript_89855.p2 ORF type:complete len:269 (+),score=41.34,Glyco_hydro_28|PF00295.13|9e-09,Pectate_lyase_3|PF12708.3|1.2e-07 R_Transcript_89855:168-974(+)
ATGAAGACATCACACGTAAGAAGTTTCACATTAATGCTTCTCACTGTTGTACTTCTTTGGTCTACAAGTTTTGATACGTGCATTGCTAGAAGAGGAAGGCATTGGAGGCACAACAGACCTCTCTCAGCCTCACAACTTAAGAAGAAAGGAAACAATAAGCACCATAGTAGTAAACCCAAGACAAAGGGTTCATACCACAAAGCTCCAGGTCATGCACCAGTTGCATCACCCCCACCAACAAAGAAAGCTCCGTGCCCTAAAGGATCGTCTCCTAAAACCAAGCCGCCTTCCAGTCCGGCACCAATTGAAGAAATTCCAACACCTGAACCACAAGGTAGCAGTGTTTTCAGTGTGATTGATTATGGAGCTAAGGGTGATGGAAGATCAGATGATACTAAGGCATTCCAAGATGCATGGGCAGCCGCTTGTAAAGTGGAGTCATCAACGATGCTAATTCCATCAGGATATCAATTTCTTGTGGGACCAATTTCATTTTCTGGTCCGTACTGCCAGAAAAATATTGTATTCCAGCTTGACGGGACGATCATCGCTCCAACAAGCCCCAATACATGGGGTCATGGTCTATTGTGGTGGCTAGATTTCACAAAATTGGTAGGGACCACAATACAAGGAAAGGGAGTCATTGATGGAAGTGGCTCGGTCTGGTGGCAAGCTGATCCGTATGGGGCTCCTGTGGATGATGAAACACAAATGATTGTCCCATTAAATCGCCCCCCAATACCAGTAATCATCCTTGCAGAAATCTTAACTACTTCTGCAGAGCATGTATGGACCACTAGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89855.p2 GENE.R_Transcript_89855~~R_Transcript_89855.p2 ORF type:complete len:269 (+),score=41.34,Glyco_hydro_28|PF00295.13|9e-09,Pectate_lyase_3|PF12708.3|1.2e-07 R_Transcript_89855:168-974(+)
MKTSHVRSFTLMLLTVVLLWSTSFDTCIARRGRHWRHNRPLSASQLKKKGNNKHHSSKPKTKGSYHKAPGHAPVASPPPTKKAPCPKGSSPKTKPPSSPAPIEEIPTPEPQGSSVFSVIDYGAKGDGRSDDTKAFQDAWAAACKVESSTMLIPSGYQFLVGPISFSGPYCQKNIVFQLDGTIIAPTSPNTWGHGLLWWLDFTKLVGTTIQGKGVIDGSGSVWWQADPYGAPVDDETQMIVPLNRPPIPVIILAEILTTSAEHVWTTSF*

Click here to download the sequence:
Link to NCBI Protein BLAST