Transcript Information: R_Transcript_89856.p1


Annotated TAIR IDAT1G10640.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3515478-3517807 | Reverse length=532
E-Value2.1E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58254130706549
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.48846398356817
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89856.p1 GENE.R_Transcript_89856~~R_Transcript_89856.p1 ORF type:internal len:94 (-),score=15.20,Pectate_lyase_3|PF12708.3|4.1e-08 R_Transcript_89856:1-279(-)
CCGGCACCAATTGAAGAAATTCCAACACCTGAACCACAAGGTAGCAGTGTTTTCAGTGTGATTGATTATGGAGCTAAGGGTGATGGAAGATCAGATGATACTAAGGCATTCCAAGATGCATGGGCAGCCGCTTGTAAAGTGGAGTCATCAACGATGCTAATTCCATCAGGATATAAATTTCTTGTGGGACCAATTTCATTTTCTGGTCCGTACTGCCAGAAAAATATTGTATTCCAGGTAACTACCAACAACCATTTGCCTTTCCCCTCTTTATCCTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89856.p1 GENE.R_Transcript_89856~~R_Transcript_89856.p1 ORF type:internal len:94 (-),score=15.20,Pectate_lyase_3|PF12708.3|4.1e-08 R_Transcript_89856:1-279(-)
PAPIEEIPTPEPQGSSVFSVIDYGAKGDGRSDDTKAFQDAWAAACKVESSTMLIPSGYKFLVGPISFSGPYCQKNIVFQVTTNNHLPFPSLSS

Click here to download the sequence:
Link to NCBI Protein BLAST