Transcript Information: R_Transcript_89867.p1


Annotated TAIR IDAT1G31840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11424006-11426528 | Forward length=840
E-Value3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.238206628697
Replicate 22.485819922437
Replicate 32.4214310355341
Condition 2: 8 Hour
Replicate 12.0189190971302
Replicate 22.5055533564119
Replicate 34.0294273047371
Condition 3: 24 Hour
Replicate 11.9900002036699
Replicate 21.8185097182506
Replicate 34.1646795387331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89867.p1 GENE.R_Transcript_89867~~R_Transcript_89867.p1 ORF type:5prime_partial len:473 (+),score=38.12,PPR_2|PF13041.2|5.6e+02,PPR_2|PF13041.2|6.9e+02,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|2.1,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|9.5,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|24,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.00034,PPR|PF01535.16|21,PPR|PF01535.16|4.4,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|0.099,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|42,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|7.7e+03 R_Transcript_89867:3-1421(+)
CTAACCTATCTTGCGCATATATTGCCTTTTCACCACTTGTTTAGCCCCGCCCACCAGATGTTCGACAAAATGCTTGAAAGGTTCTGGGACCTTGATCCTTTTAGTGCCCTTTCTGATGTTGTAAGGACTTATTGGTCTAACCCCAATACAGTTTATAGGTTCCTTGTTGCTGGGTCTTTTAGGCATGGTAGATTTGATAAGGGCATTGATACTTTCTTGAGGATGTCCTATACTAGGATTGACGTTGCCCCTTATGCCTTGAGAATTAAGGTGGATTCATTGGTTGTTTCTCATAGCATTGATGGGATTATGAGTATATTTGATGAATTGTGTGATCAGTATAGTAAAAAATTGGTGCAGCATTTCAATATTTATGAGTCTGTTATGATGAGTTTTGTTGGTAATCAGCTGTTTGAGATGGCATTGTATTCTCACAGAAAGAAGATTGATAGAGGAAATTTGAAAGATGCATTTAGATGGTACAAAATGATGTTCCAGTGTGGTTATTTTCCTGAACTTGTCATTTATTCGATACTTGTTAATGGGTCGAGCAAGAAAGGGCATGTAAAGGAAGCACTTCAGATGTTCTTCCAGGTAAAAATGATTGGTATACTCCCTAATGTACATTTTTTCAATACTTTGATAGATGGCTATTGTAGATTGGATCAAACGGAGGACATGATTAAGGTGTACTTTTTTATGCAAATACATAACATAATATCAGATGCAATAACTCACAGTTTGTTTTTTAAAGCACTGATTGCGCAGGGGAAACTCAACATGGCATTGGCGTTCTTTGTTCAATTGATTAAAAACGGGTTGTCTTTGGATTCCATTGCATTTTGCATACTAATTGACGCCTCTTGCAGGCAAAACAAACTCGAATCTTTATTATGGCTTTTCCAGCTTGTGCTAAGGCATCAGCTGAAATTTGATATTTCCCTGTACAATGTTCTCCTTAAAATGGGAAATGCCCATTGCCTCTTGTATGCCACTGCCATGTTGTGCTTACAAGCAATGACAGCTGCTAATTTATCTTGTCACAGTTTTCTGCATCAACTTTTCATGATTTGTTTTTTAGCATCTAGAGACTTTTGCCGGGGCAATCTTGCGGTTGCGCTTACTAGGTGCTATTTAGGCCATATTATGCAGGAAGTTCTTTTTGTTGAAAATGGAGACTATGGGTTTTATAAACTCCATTTTTTTATTGGATTGTTTCTACTCATGCTTTTCTCAAAGGTAGTATGTAAAATTCAATCTCTAACTCTTGTTGGGATCTATTTTATTAATGGTTCCTATGCACATACTATCCAGTTCTCTTTCTTCACTGAGGATTTAAGGTTGTCATACTCTCCCTTTCGTATGCCTTCTAACTTTGTATTAATTTGGCTGTATTTTTCTTCGATGCTTTGCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89867.p1 GENE.R_Transcript_89867~~R_Transcript_89867.p1 ORF type:5prime_partial len:473 (+),score=38.12,PPR_2|PF13041.2|5.6e+02,PPR_2|PF13041.2|6.9e+02,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|0.00025,PPR_2|PF13041.2|2.1,PPR|PF01535.16|6.8e+02,PPR|PF01535.16|9.5,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|24,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.00034,PPR|PF01535.16|21,PPR|PF01535.16|4.4,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|0.099,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|42,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|7.7e+03 R_Transcript_89867:3-1421(+)
LTYLAHILPFHHLFSPAHQMFDKMLERFWDLDPFSALSDVVRTYWSNPNTVYRFLVAGSFRHGRFDKGIDTFLRMSYTRIDVAPYALRIKVDSLVVSHSIDGIMSIFDELCDQYSKKLVQHFNIYESVMMSFVGNQLFEMALYSHRKKIDRGNLKDAFRWYKMMFQCGYFPELVIYSILVNGSSKKGHVKEALQMFFQVKMIGILPNVHFFNTLIDGYCRLDQTEDMIKVYFFMQIHNIISDAITHSLFFKALIAQGKLNMALAFFVQLIKNGLSLDSIAFCILIDASCRQNKLESLLWLFQLVLRHQLKFDISLYNVLLKMGNAHCLLYATAMLCLQAMTAANLSCHSFLHQLFMICFLASRDFCRGNLAVALTRCYLGHIMQEVLFVENGDYGFYKLHFFIGLFLLMLFSKVVCKIQSLTLVGIYFINGSYAHTIQFSFFTEDLRLSYSPFRMPSNFVLIWLYFSSMLCR*

Click here to download the sequence:
Link to NCBI Protein BLAST