Transcript Information: R_Transcript_89893.p1


Annotated TAIR IDAT2G38440.1
Annotated Gene NameSCAR Homolog 2
Annotated Gene Symbol(s)ITB1, SCAR2, DIS3, WAVE4, ATSCAR2
Annotation TypeOrtholog
Chromosome Positionchr2:16095550-16100851 | Forward length=1399
E-Value1.1E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6946916035799
Replicate 21.9297011356543
Replicate 32.8122812275112
Condition 2: 8 Hour
Replicate 13.2076818963812
Replicate 23.3127232357312
Replicate 35.4529529847253
Condition 3: 24 Hour
Replicate 14.4403989288152
Replicate 23.4489705260985
Replicate 34.8489222317338


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89893.p1 GENE.R_Transcript_89893~~R_Transcript_89893.p1 ORF type:3prime_partial len:1458 (+),score=386.31 R_Transcript_89893:189-4559(+)
ATGCCGCTGAACAGGTACCAGATACGAAACGAGTACAGTTTAGCGGATCCAGAGTTGTATAAAGTTGCCGATAGAGATGATCCTGAAGCTCTTTTGGAAGGCGTTGCCATGGCCGGACTGGTTGGCGTTCTTCGCCAGCTCGGCGACTTAGCTGAGTTTGCGGCTGAGATATTCCATGGCTTACATGAGGAAGTCATGGCTACTGCTTCAAGAGGTCACAGCCTAATTGTTCGAGTCCAACAACTAGAAGCTGAATTTCCTTCTGTAGAGAGGACACTTCTTTCTCAAACAAGCCATACAGCTTTTCTCTACAACTCAGGTGTTGACTGGCATGCTAATCTCCGTATGGATGAGAATGTAGTCACTCAGGGAGATTTACCTCGATTTGTAATGGACTCTTATGAGGAGTGTCGTGGCCCTCCTCGGCTCTTCCTGCTTGACAAGTTTGATGTTGCGGGTGCGGGTGCATGTTTAAAACGCTACACAGATCCCTCATTCTTCAAAGTAGAAGCAACTTCATCTACTGGCAAAAAATCAGAAGGTCAGAGGGAAAAGAAAACTCGAAGAGTGAAGAGGAGAGGACCACGTTGGAGAAATGGAGATACTCCAGAAACCTTTCCATCATCACATGCCAAACTACATCAACTGTTTTTGGAGGAGAGTATTGAGAGTGGTGGTAATGATCCTGAACGTCGTGTGAAACTGAAGAAGAGGCAATTTACAGGATCTCTGTTTGATCAGGATAAGGGTAAAAGCTACATGGAGAAATTTCTGGATACTTGTTCACCCGAGCAGAAAATTGTTCATGAAGTCTGCATCGATGCTTTGCCCCTGCCTTGGACTTCGGAGAATGGTTGTGAATCTGGTCGTGAGATAGTTGAAATTGGCACTGTTAGTCCCCTCAAAGAATCTACACAGGCTGATAAAAGCTCATCACCTAATACCAGGGAAATGGTGGTAAAACCATCCATAGTGGATATTAACGACAGCAATTTGAATGAAACTATACCAACTGAAGCTTTGGCTGGGCCTGGACTAAACCAAGAAGATGATGCTGGTGATATGTCATCTACTCTAAAGTTGATGAATGGTGAAGAACATGCTGGTAGAGAAAGTACGTCAGAAGTTGGTACTGGTGAAGGTTGCAATTCAGATGATGCTGGTAGTGAGATTGATAATTATATGGATGCCCTTGCTACCATTGAGTCTGAAGTTGAGACAGATTCTGAATACAAGCAAAATCCACACTATATGAATCTGAAACCAATCGTGGTTGATTCTGATGCGAGTGAAGGGCGGAGAGCACCTCAGGGTTATTTTCTGGATTCTCAGTCAATCGAGAATTCGATTACATCAGAGGATGGTACCAATTTTTCCAAAGATAGAGATTCTTTATGCTCAATTAGTGTCGACACCCTGGCTGAAGCTACACCAGGCCATGATGCAGCATGTGTGACTATTACTTCTGTTACAACCGCTAATAATGATCGTGAGAACATGTCTCTTGATCGTCATTCCATGTCTGATGAGGTTCCTCGAAATATAACAGAACTGCATGCTGGAGGGAGTACTGTGGCTGGTGGAGTTGATGACATTTTCAACAGTGCACAGGAGTTTGGGGAGGCTTCTGGCAATTCATGTCTTACAGATCCAAATGCCATGATCCCTTCTGTAGACCAGGAAACTATTGTGAGGGAGAATTCCTTACCAAGGACAGGCTTGGATGAGGTTTGCTTTAAGTCTACTGTGCCTGATATTTTGTCTGGAGGTCTTGATCAAGGGCATGCTAATCAAACTAATTTTTGGCCTTGCAATGAAGCAGTTGTTGATGCCCGTGAGAGGACACCTAGTGGGCATTGGTCTAGTGGAGAGCAGCCTATGCATGATATGGCAGGTCGCAATTTTAGTGCCTATTCTGAAAGTTTACCTAGCACTCATGACGATTTAGTTGATTTGCTTCAAATAGAATCTAAAAACACTGATTCAGTTGAAGAGCACAGTAATGACTTGGGCATGACGGATGTCGATGCTTGTTCAGACATCAAACCTCCAGCTGCTAATCCACCTCTGTGTGATCCTGAAAATCCAGAAGCTGTGAAACCTATTGATGTGGCTTCTAATGTAGATTTCTGTATTCCAACAATCGAAGGGCATTCAGAAGATAAGCATTCCGCCTCAGATTCCGAACAGAATTTTAAGATTCCAGAGCAGATCTCTGAATTGATGGATCCCGATTATACACCTCCATTCAATTTGTCAGCAGAAGCTCTCCCTAAATCTCAAGAAGTTCATAGTATCCAAGAGGTATTCACTGATGTTGAGGGCGAAGAGAAAGCATCATCTGCTTACCCAAGTGTTGGTCATACTGAAACATTGTTTCCCTTCTCTAATAGGTCAGAAACTTGTGCTTCAGCAAGCACTTTCTCAAAATACACCGCTAAAGCTGAATTAGCCAAGGCTGGCTCCTTAGAGGATGCTCTACCAGGGGCTACACCTTCTGGGGAATCTAATACTGAGGTAGTTTCTCAATCTTCTGATGGGGAAGCAATAGATAACTCCACGTTGGGAAAGTCATCTCCTGTGCTGGATTTGTCAGAGTCCCAAGATCCAGGGGAGAAGCCGCCCTCAGAGAAAGCCAATGACACACCATTAGATCATCATCTTGTTGAAGCTGGTAAGCAATATTCTGGGAGTGAGACCAATAATGAAGGACCCTCTGTTTCTGTTAGTGGAGATGAATTCGAAACTACACTTCATAGGGTTTCATCTGAAAGAGATGCTGCTTGTGAGGATGTTGCTCCTAATTTGGATCAATTGGATACAGTTGAGACTGTAAAAAGTTGGGATGACTGTGAAACTCAAGTGATCATCAGTGATCATGATCAGAATGACAACCATCATGATGAGTACAAGAATGTTTCTCATGATGCAGTTTTGTTTGATATAGCTTCTAAGCCTGCCAGTGATCCAAATTCTGCATTGACAGCTGAGAAATCTTTAAATTTTGATAGTAGTATGGGAAATGTAGAACATACAGATACTGGCAGTATCAGCCAAGATGATGCTGAGGAGTATCACCATGAACAGGTCATTCCTGTAACCCCATCTTCATCACTGGTTACTGAGTTCCAGGAACTACCTGTCTCAGAAGAACCTGTTTCGGGATCAGTCACTGAGGAATGTCATCAGAATGAGGAGGAACTTGCTTCAATGCCTAGTGCAGAACTGGCTGCACAAAAGCGCGTGGATGTTGTTGAAGATGTTCCTGTAAATTCAAATCCCAACATGTGGAATATGTCCTCTCATGGAACTCCCACAGTGACATTGCTCAATGATTCATTGACGGACGATGTTCAGAGTAGTGAGAAGTTTGTCGTAGAGCCACTATCAGAGAATACCAGCAAAGATATTAAGTCTACCTCCTCCCACCAGATCCATTTGTTCGAAGGAGAGGAAGATGATGCGGATTTACATGACCGTGTATTGCATGATAACCAAGCTGAAGTGAAACCTTTACATGTTGTTGCATTGTCTTCTCAGTCAATGAACTATTCCTATCAGATTCAGGCTCCAGCGCATATTGAGAAAGAGGGAACTTCTTTGCATGCTAATGTATTTTCTTCTCAGTCAATTAACTATTCTAAGCAGATTCAGGATCCAGCACATCTTGATAGAGAGGGAGTGCCTTTGCATGCTGATGAATTGTCTTCGAAGTCAGTTAACTTCTCTACGCAGAATCAGGCTCCTGCACTTGTTGATAGAATAGGAATTATTAATGCTACTTCTTCATATAATCAAGGCCAACAGTTGGTGCCTACTTTTGCACTACAGTCAGCCGTGTGCTCAGTAGACAGCTCTAGGATACCCATGATAGAGCCTACTGCCATCTTCCCTGGAAATAACTTGCTATATGGCTCTAACCAAACCCCTCCTAGAGTTGAGAACTCGAGGGAACCATTCTATACATCTGGTTTTCCCATCTTTGGCATGCTCCCAGCTGAACCTCAAATCAATCTGGATTCACCTCCTCTGCCTCCTTTGCCTCCTATGCAATGGAGACTTAGCAGGTTCCAAAACCCTTCTGCAGCTCCAGAGAGACAGAATGTGCAACATACACATAGTCCAATCCAACCAGTGATGCAACCAACTTCCAATAATGAACCTGATTCTGTTGCCCAAACATCTAAACCAGAGACAAAACCAGAATCTTCTGATGATTTTGGGGCACAGCAAGGAGTCCCTCTTCCAATGACAAATGCAGTTCCAGAGGTTTCATCAGTGAACATAAATGAAATGGGAAGGGCGCTGGAATCATCAGTGAACATAAATGAAATGGGAAGGGCGCTGGAATCATCAGTGAACATAAATGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89893.p1 GENE.R_Transcript_89893~~R_Transcript_89893.p1 ORF type:3prime_partial len:1458 (+),score=386.31 R_Transcript_89893:189-4559(+)
MPLNRYQIRNEYSLADPELYKVADRDDPEALLEGVAMAGLVGVLRQLGDLAEFAAEIFHGLHEEVMATASRGHSLIVRVQQLEAEFPSVERTLLSQTSHTAFLYNSGVDWHANLRMDENVVTQGDLPRFVMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKVEATSSTGKKSEGQREKKTRRVKRRGPRWRNGDTPETFPSSHAKLHQLFLEESIESGGNDPERRVKLKKRQFTGSLFDQDKGKSYMEKFLDTCSPEQKIVHEVCIDALPLPWTSENGCESGREIVEIGTVSPLKESTQADKSSSPNTREMVVKPSIVDINDSNLNETIPTEALAGPGLNQEDDAGDMSSTLKLMNGEEHAGRESTSEVGTGEGCNSDDAGSEIDNYMDALATIESEVETDSEYKQNPHYMNLKPIVVDSDASEGRRAPQGYFLDSQSIENSITSEDGTNFSKDRDSLCSISVDTLAEATPGHDAACVTITSVTTANNDRENMSLDRHSMSDEVPRNITELHAGGSTVAGGVDDIFNSAQEFGEASGNSCLTDPNAMIPSVDQETIVRENSLPRTGLDEVCFKSTVPDILSGGLDQGHANQTNFWPCNEAVVDARERTPSGHWSSGEQPMHDMAGRNFSAYSESLPSTHDDLVDLLQIESKNTDSVEEHSNDLGMTDVDACSDIKPPAANPPLCDPENPEAVKPIDVASNVDFCIPTIEGHSEDKHSASDSEQNFKIPEQISELMDPDYTPPFNLSAEALPKSQEVHSIQEVFTDVEGEEKASSAYPSVGHTETLFPFSNRSETCASASTFSKYTAKAELAKAGSLEDALPGATPSGESNTEVVSQSSDGEAIDNSTLGKSSPVLDLSESQDPGEKPPSEKANDTPLDHHLVEAGKQYSGSETNNEGPSVSVSGDEFETTLHRVSSERDAACEDVAPNLDQLDTVETVKSWDDCETQVIISDHDQNDNHHDEYKNVSHDAVLFDIASKPASDPNSALTAEKSLNFDSSMGNVEHTDTGSISQDDAEEYHHEQVIPVTPSSSLVTEFQELPVSEEPVSGSVTEECHQNEEELASMPSAELAAQKRVDVVEDVPVNSNPNMWNMSSHGTPTVTLLNDSLTDDVQSSEKFVVEPLSENTSKDIKSTSSHQIHLFEGEEDDADLHDRVLHDNQAEVKPLHVVALSSQSMNYSYQIQAPAHIEKEGTSLHANVFSSQSINYSKQIQDPAHLDREGVPLHADELSSKSVNFSTQNQAPALVDRIGIINATSSYNQGQQLVPTFALQSAVCSVDSSRIPMIEPTAIFPGNNLLYGSNQTPPRVENSREPFYTSGFPIFGMLPAEPQINLDSPPLPPLPPMQWRLSRFQNPSAAPERQNVQHTHSPIQPVMQPTSNNEPDSVAQTSKPETKPESSDDFGAQQGVPLPMTNAVPEVSSVNINEMGRALESSVNINEMGRALESSVNINE

Click here to download the sequence:
Link to NCBI Protein BLAST