Transcript Information: R_Transcript_89898.p1


Annotated TAIR IDAT1G13340.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4569622-4571043 | Reverse length=409
E-Value9E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2976038593402
Replicate 22.2886962539093
Replicate 31.8455665361829
Condition 2: 8 Hour
Replicate 11.1604675330448
Replicate 21.377684663201
Replicate 31.8065584029769
Condition 3: 24 Hour
Replicate 11.6320716038652
Replicate 20.94074563988244
Replicate 30.82986558054587


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89898.p1 GENE.R_Transcript_89898~~R_Transcript_89898.p1 ORF type:complete len:211 (+),score=58.60,Ist1|PF03398.10|1.1e-34,Ist1|PF03398.10|1.5e+02 R_Transcript_89898:475-1107(+)
ATGCTGGATGTGTTTGTCATGATCGAGGGATATTGTGTTCTTCTGAGTGAGAGGGTCAATCTCATTGAACATGACAAAGAATGCCCGGATGAGCTCAAAGAGGTGACATCTAGCCTGATTTTCGCTGCTTCAAGATGTGGAGAATTCCCAGAACTGCAAGAGATGCGTTCAATTTTGACAACTCGATATGGGAAAGAATTTGCTGCTCGTGCTATTGAGTTGCGCAACAGTTGTGGCGTCAACACTCAGATGATTCAGAAGCTGTCTACAAGGCAACCGAGCTTGGAAGCCAGAGTGAAGGCATTGAAAGAGATAGCCGATGAGAATGGCATTACTCTAAAGCTAGAAGACTCTCTGTCGATTTCAGCTCAGGAAGAACTGCACAGGAAGGAAAACCAGCCTGCACCAAACAGGTCAGCAAGTTTGGATAGTCCTAAAGTTGGAGAGGATATGGGCAGTTATACTGAAAATATAGACAAGATTGAAGGATTCAGTGATTCATTGCACAGAAGAAAGCAGTATAAAGATGCTGCTGATGCAGCCCAAGAAGCTTTCATGTCGGCAGCATATGCAGCAAGGGCTGCAAGGGCAGCTGTGGAGCTCTCTCGGTCTAGCCCCCCGAGCACCAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89898.p1 GENE.R_Transcript_89898~~R_Transcript_89898.p1 ORF type:complete len:211 (+),score=58.60,Ist1|PF03398.10|1.1e-34,Ist1|PF03398.10|1.5e+02 R_Transcript_89898:475-1107(+)
MLDVFVMIEGYCVLLSERVNLIEHDKECPDELKEVTSSLIFAASRCGEFPELQEMRSILTTRYGKEFAARAIELRNSCGVNTQMIQKLSTRQPSLEARVKALKEIADENGITLKLEDSLSISAQEELHRKENQPAPNRSASLDSPKVGEDMGSYTENIDKIEGFSDSLHRRKQYKDAADAAQEAFMSAAYAARAARAAVELSRSSPPSTR*

Click here to download the sequence:
Link to NCBI Protein BLAST