Transcript Information: R_Transcript_89899.p1


Annotated TAIR IDAT1G13340.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4569622-4571043 | Reverse length=409
E-Value5.8E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0925921423136
Replicate 22.212614617861
Replicate 33.1843446882544
Condition 2: 8 Hour
Replicate 13.1293594215089
Replicate 23.4594189395556
Replicate 34.4361559587941
Condition 3: 24 Hour
Replicate 13.2943938622714
Replicate 22.620916415248
Replicate 34.0241968258421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89899.p1 GENE.R_Transcript_89899~~R_Transcript_89899.p1 ORF type:complete len:446 (+),score=117.99,Ist1|PF03398.10|1.1e-52,Ist1|PF03398.10|8.5e+02 R_Transcript_89899:182-1519(+)
ATGGGAAAGAAGCTTGATGCTCTGCTAGGAAGAAGCTTCAAGGCCTCAAAATTCAAGGCTCTTGTCAACCTTGCCTTATCTCGGCTTGCTGTCCTCAAGAACCAGAAGCAAACCCGCTGCTCCATGGCTCGTAATGATGTCCTTCAATTCCTTAACATCGGTCAACATGACCGAGCTCTCCTCAGGGTTGAGCAAGTGATCAAGGAGCAAAACATGCTGGATGTGTTTGTCATGATCGAGGGATATTGTGTTCTTCTAAGTGAGAGGGTCAAACTCGTAGAACATGACAAAGAATGCCCTGATGAGCTCAAAGAGGTGATATCTAGCCTTATTTTTGCTGCTTCAAGATGTGGAGAATTCCCAGAACTGCAAGAGATGCGTTCAATTTTGACAACTCGATATGGGAAAGAATTTGCTGCTCGTGCTATTGAGTTGCGCAACAGTTGTGGCGTCAACACTAAGATGATTCAGAAGCTGTCTACCAGGCAACCGAGCTTAGAAGCCAGAATGAAGGCATTGAAAGAGATAGCCGATGAGAATGGTATTGCTCTAAAGCTAGAGGACTCTTTGTCGATTCTAGCTCAGGAAGAACTGCACAGGAAGGAAAACCAGCCTGCACCAAACAGGTCAGCAAGTTTGGATAGTCCTAAAGTTGGAGAGGATATGGGCAGTTATACTGAAAATATAGACAATATTGAAGGATTCAGTGATTCAATGCATAGAAGAAAGCACTATAAAGATGCTGCTGATGCAGCCCAAGAAGCTTTCATGTCGGCAGCATATGCAGCAAGGGCTGCAAGGGCAGCTGTGGAGCTCTCTCGGTCTAGCCCCCGAGCACCAGATAATTCCAATAGTCCAACTGATCAAAGAAAACACGTCTTCAATTCAGATAGCGACATAAAACCTAGAATTGAAACTAGTAAGGTAGACGATTCAGGGGAAACTGCAGAGCCAGTGCTGGGGCTCGACAAGGCTCATCCTGTTGGCAGGCTTAGCCTCAATTCAGATGATGAAGTGACCGAAGAAAAGACTGAAGTTCCTGAGGTAAGGTTTTCAGGAGCACAAGAAGAAAAGGAGAAAAAATTGCCACACAAGGCTATGTTTGATGAGAGTGATGATGAGGTTAAGAATGAGAAGTTCAATTTTCTCAGCGAGGATAATCCATGGGGAGAAAGAGGAACTAAGTCGCATTATTCCAATGAGAAGCTGACGCCTTCAAGATTTCAAGCAGGTTCAGGAATAGATCATGAGCCACATTTCTCTGCAGAATTTGCAGTAAAGAGTGCACACAGGATGAATACACTGATCAGGGCAGTTTCTGTGAGGACCAGAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89899.p1 GENE.R_Transcript_89899~~R_Transcript_89899.p1 ORF type:complete len:446 (+),score=117.99,Ist1|PF03398.10|1.1e-52,Ist1|PF03398.10|8.5e+02 R_Transcript_89899:182-1519(+)
MGKKLDALLGRSFKASKFKALVNLALSRLAVLKNQKQTRCSMARNDVLQFLNIGQHDRALLRVEQVIKEQNMLDVFVMIEGYCVLLSERVKLVEHDKECPDELKEVISSLIFAASRCGEFPELQEMRSILTTRYGKEFAARAIELRNSCGVNTKMIQKLSTRQPSLEARMKALKEIADENGIALKLEDSLSILAQEELHRKENQPAPNRSASLDSPKVGEDMGSYTENIDNIEGFSDSMHRRKHYKDAADAAQEAFMSAAYAARAARAAVELSRSSPRAPDNSNSPTDQRKHVFNSDSDIKPRIETSKVDDSGETAEPVLGLDKAHPVGRLSLNSDDEVTEEKTEVPEVRFSGAQEEKEKKLPHKAMFDESDDEVKNEKFNFLSEDNPWGERGTKSHYSNEKLTPSRFQAGSGIDHEPHFSAEFAVKSAHRMNTLIRAVSVRTRR*

Click here to download the sequence:
Link to NCBI Protein BLAST