Transcript Information: R_Transcript_89920.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.18526099639
Replicate 219.298727191151
Replicate 325.376116400844
Condition 2: 8 Hour
Replicate 120.873765720985
Replicate 226.674470394946
Replicate 331.926237119546
Condition 3: 24 Hour
Replicate 121.329593949144
Replicate 216.955957898855
Replicate 320.676895491452


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_89920.p1 GENE.R_Transcript_89920~~R_Transcript_89920.p1 ORF type:complete len:705 (+),score=114.88,Ion_trans|PF00520.27|3.9e-36,cNMP_binding|PF00027.25|1.7e-07 R_Transcript_89920:363-2477(+)
ATGAAGTATAACCAGGAGAAGGTTGTCAGGTTTCAGGAATGGGTTCCTCAGAAAAGTGCGGATGGGCACTTTTTTGTGAAAGATGATATTCACCCTGGTATATTCAGAAGGTTGTTTGACTTGATTTTGGATAGATTCAAAAGAGGCTTGGACTACTTTCCTGAGGGTTTTAGGACTGGGAAATGTTTAAGTGGGAGCTCTTTGCATGCCTCGTGGTTTAAGAAGAAAGTTTTAGATCCACAAGGCACATTTCTTCAGAAGTGGAATAAGATATTTGTTTTATCATGCGTTATTGCAGTGTCAATAGATCCTTTGTTCTTTTACATCCCTGTAATTAACAATGATAAGAAGTGCCTTGATTTGGACAATAAGTTGGAGATCACAGCTAGTGTTTTGCGCTCTTTCACTGATATCTTTTATGTCCTTCATATCATCTTCCAGTTTCGTACTGGTTTTATTGCTCCCTCTTCCCGGGTCTTTGGCAGAGGTGTTCTGGTCGAAGATGCAAAAGAAATTGCAAAAAGATATTTGTCCTCTTACTTCTGGATTGACATTCTTGCTGTACTTCCTTTACCACAGGTGGCGATCTTAATTATCATACCTAAATTGAGAGGCTCGAGGTCATTGAACACAAAGAACTTGCTGAAGTTTGTTGTGTTCTTCCAGTACATTCCCAGGATTCTTAGAGTGTTTCCATTATATAAAGAAGTTACAAGAACCTCTGGCATCTTGACTGAAACAGCTTGGGCTGGAGCTGCCTTCAATCTCTTTCTGTACATGCTTGCAAGTCATGTAGCAGGAGCATTTTGGTACCTGTTTTCTATAGAACGCGAAACAACATGCTGGAGGAAGGCCTGTGGAAAGCACCCTGGGTGTGATTATGCTACTTTATATTGTGACATGAGTTCTGGAAATAACACTTATGTGGAACAGTCATGCCCTCTCATATCTGATGGTCCCTTCGATTTTGGAATTTTTCTTCATGCCCTAAAGTCTGGTGTAGTGGAGACAAGAGATTTCCCAAAGAAGCTCTTCTTCTGTTTCTGGTGGGGCCTGCAAAATTTGAGTGCCCTTGGTCAAGACCTTGAAACAAGTACCTATATCTGGGAAATCTGTTTTGCTATATTGATAGCAATTGCTGGCTTGGTGTTGTTTGCGTTTCTTATCGGAAATATGCAGACCTATTTGCAATCAATAACAACGAGATTAGAGGAGATGAGAGTTAAAAAACGAGATTCAGAACAATGGATGTCCCACCGCCTTCTCCCTGAGAATCTGAGAGAGAGGATCAGACGGTATGAACAATACAAGTGGCAAGAAACAAGAGGGGTTGATGAAGAGAACTTGCTCCAAAACCTTCCCAAGGACCTTAGGAGGGATATAAAGCGTCATCTTTGTTTGGGGCTGCTTACAAGGGTCCCTATGTTTGAGAAAATGGACGACCAGCTTTTGGATGCAATGTGTGATCGTCTGAAGCCAGTACTGTACACGGAGGACAGCTACATTATCCGGGAAGGGGACCCAGTTGATGCGATGGTTTTCGTCATGCGTGGCAAGCTTCTGACAATGACAACAAATGGTGGGAGGACGGGTTTCTTCAACTCCGATTATTTGAAAGCTGGTGATTTTTGTGGTGAGGAACTCCTTACGTGGGCCCTTGATCCCCACTCTTCATCCAACCTTCCTCTATCAACCAGAACGGTTCAAACTCTAACAGAAGTCGAAGCTTTTTCCCTAATGGCTGATGATTTGAAGTTTGTTGCTTCTCAATTCCGAAGACTCCATAGCAAACAGCTCCGTCACACCTTCAGGTTTTACTCCCAGCAGTGGAGGACTTGGGCGGCTTGCTTTATACAGGCAGCTTGGAGGCGGTACCTCAGGAAGAAGATGGAGCTGTCACTCAAGGAAGAGGAGGATAGATTACAGGATGCATTGGCTAGAGAAGGCGGGAGCTCTCCTAGTTTAGGTGCAACTCTATATGCATCGAGGTTTGCAGCTAATGCACTTCGTAATTTAAGGAAGAACGTTGCTCGGAAGGCAAGGTTGCCAGAGAGAATACCTCCTATGCTGCTTCAGAAGCCCGCAGAGCCAGATTTCTCAGTAGAGGATCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_89920.p1 GENE.R_Transcript_89920~~R_Transcript_89920.p1 ORF type:complete len:705 (+),score=114.88,Ion_trans|PF00520.27|3.9e-36,cNMP_binding|PF00027.25|1.7e-07 R_Transcript_89920:363-2477(+)
MKYNQEKVVRFQEWVPQKSADGHFFVKDDIHPGIFRRLFDLILDRFKRGLDYFPEGFRTGKCLSGSSLHASWFKKKVLDPQGTFLQKWNKIFVLSCVIAVSIDPLFFYIPVINNDKKCLDLDNKLEITASVLRSFTDIFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDAKEIAKRYLSSYFWIDILAVLPLPQVAILIIIPKLRGSRSLNTKNLLKFVVFFQYIPRILRVFPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVAGAFWYLFSIERETTCWRKACGKHPGCDYATLYCDMSSGNNTYVEQSCPLISDGPFDFGIFLHALKSGVVETRDFPKKLFFCFWWGLQNLSALGQDLETSTYIWEICFAILIAIAGLVLFAFLIGNMQTYLQSITTRLEEMRVKKRDSEQWMSHRLLPENLRERIRRYEQYKWQETRGVDEENLLQNLPKDLRRDIKRHLCLGLLTRVPMFEKMDDQLLDAMCDRLKPVLYTEDSYIIREGDPVDAMVFVMRGKLLTMTTNGGRTGFFNSDYLKAGDFCGEELLTWALDPHSSSNLPLSTRTVQTLTEVEAFSLMADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYLRKKMELSLKEEEDRLQDALAREGGSSPSLGATLYASRFAANALRNLRKNVARKARLPERIPPMLLQKPAEPDFSVEDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST