Transcript Information: R_Transcript_90139.p1


Annotated TAIR IDAT2G40060.1
Annotated Gene NameClathrin light chain protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16726564-16728001 | Forward length=258
E-Value3.3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.083834946312
Replicate 245.233187392025
Replicate 341.909754637334
Condition 2: 8 Hour
Replicate 130.390816301082
Replicate 236.66897022188
Replicate 335.486106936319
Condition 3: 24 Hour
Replicate 147.244362140613
Replicate 247.159958721009
Replicate 343.353138543822


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90139.p1 GENE.R_Transcript_90139~~R_Transcript_90139.p1 ORF type:5prime_partial len:311 (+),score=77.11,Clathrin_lg_ch|PF01086.13|8.4e-09 R_Transcript_90139:1-933(+)
CCCAAATTACAAGTGGTCAGTGCTCACTGCTCGGATCACAATTCACACATCCTCTCACTTTTCTCTCTCCATTTCACAGTTGGGTTCCTCTCCTCAATCCTTAAAGTTCATCACCTTAACAACTCAAATTCTAAATCTCCAGAGAGAATGTCTTCTTTAAATCATGATACCTTCGACGAATCAAGTCACTCTTTTGAAGATGACGTCACAGGGGGAGGCTACGCTCCCCCTCCTCAGTACACTGATTTCTCCGATCCCCACTCAGTCAACAACGACGACGTTTTCGGTGGTTCAAATCAAGAGGACCCGATCTTCGGCGAGGCTGCTAATGGACCCGTTTTCGTGGAATCATCAAATGGGCCCATTTTGCCTCCTCCTTCTGAGATGCAAGAAGAAGGCTCTGCTCTTCGTGAATGGCGCAGGCAAAATGCAATGATACTGGAGCAGAAGGAGAAAAGAGAGAAAGAAATCTTGAGCCAAATAATTGACGAAACGAATGAGTACAAAACTGCCTTCCATGAGAAGAGAAAGGTCACATGTCAGAACAATAAAACCAACAATCGTGAAAAGGAGAAGTCGTTTCTGGCCAACCATGAGAAGTTTCATAAGGAGGCTGACAAGAGTTACTGGAAAGCAATTGCAGAACTCATCCCTAATGAGGTCCCCGCTATAGAGAAGAAGAGAGGGAAGAAGGACCAGGAAAAGAAGCCTTCAGTCATTGTGGTCCAAGGACCAAAGCCTGGGAAGCCAGCTGACCTTGCAAGGATGAGGCAGATACTTTTAAAGCTCAAGCACAATACTCCTTCTCACCTGAAGCTCGCACCACCGCAAGCAGTGACCGCAACCAAGGATGGTAAGACTGGTGATGCCACTGCCGATACACCTAAGCCTGCAGCTGTTGCATCTACCCAAGAGGCAGTGGCAGTTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90139.p1 GENE.R_Transcript_90139~~R_Transcript_90139.p1 ORF type:5prime_partial len:311 (+),score=77.11,Clathrin_lg_ch|PF01086.13|8.4e-09 R_Transcript_90139:1-933(+)
PKLQVVSAHCSDHNSHILSLFSLHFTVGFLSSILKVHHLNNSNSKSPERMSSLNHDTFDESSHSFEDDVTGGGYAPPPQYTDFSDPHSVNNDDVFGGSNQEDPIFGEAANGPVFVESSNGPILPPPSEMQEEGSALREWRRQNAMILEQKEKREKEILSQIIDETNEYKTAFHEKRKVTCQNNKTNNREKEKSFLANHEKFHKEADKSYWKAIAELIPNEVPAIEKKRGKKDQEKKPSVIVVQGPKPGKPADLARMRQILLKLKHNTPSHLKLAPPQAVTATKDGKTGDATADTPKPAAVASTQEAVAVA*

Click here to download the sequence:
Link to NCBI Protein BLAST