Transcript Information: R_Transcript_90140.p1


Annotated TAIR IDAT2G40060.1
Annotated Gene NameClathrin light chain protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16726564-16728001 | Forward length=258
E-Value3E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.639804495537
Replicate 233.13793100847
Replicate 336.51904811655
Condition 2: 8 Hour
Replicate 130.666003384409
Replicate 229.362052513506
Replicate 335.78128994498
Condition 3: 24 Hour
Replicate 138.727547016702
Replicate 241.926131117871
Replicate 336.432888632184


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90140.p1 GENE.R_Transcript_90140~~R_Transcript_90140.p1 ORF type:5prime_partial len:313 (+),score=81.55,Clathrin_lg_ch|PF01086.13|8.2e-09 R_Transcript_90140:2-940(+)
CCAAATTACAAGTGGTCAGTGCTCACTGCTCGGATCACAATTCACACATCCTCTCACTTTTCTCTCTCCGATTTCACAGTTGGGTTCCTCTCATCAATCCTTGAAGTTCATCACCTTAACAACTCAATTTCTAAATCTCGAGAGAGAGAGAGAATGTCTTCTTTAAATCATGATACCTTCGACGAATCAAGTCACTCTTTTGAAGATGACGTCACAGGGGGAGGCTACGCTCCCCCTCCTCAGTACACTGATTTCTCCGATCCCCACTCAGTCAACAACGACGACGTTTTCGGTGGTTCAAATCAAGAGGACCCGATCTTCGGCGAGGCTGCTAATGGACCCGTTTTCGTGGAATCATCAAATGGGCCCATTTTGCCTCCTCCTTCTGAGATGCAAGAAGAAGGCTCTGCTCTTCGTGAATGGCGCAGGCAAAATGCAATGATACTGGAGCAGAAGGAGAAAAGAGAGAAAGAAATCTTGAGCCAAATAATTGACGAAACGAATGAGTACAAAACTGCCTTCCATGAGAAGAGAAAGGTCACATGTCAGAACAATAAAACCAACAATCGTGAAAAGGAGAAGTCGTTTCTGGCCAACCATGAGAAGTTTCATAAGGAGGCTGACAAGAGTTACTGGAAAGCAATTGCAGAACTCATCCCTAATGAGGTCCCCGCTATAGAGAAGAAGAGAGGGAAGAAGGACCAGGAAAAGAAGCCTTCAGTCATTGTGGTCCAAGGACCAAAGCCTGGGAAGCCAGCTGACCTTGCAAGGATGAGGCAGATACTTTTAAAGCTCAAGCACAATACTCCTTCTCACCTGAAGCTCGCACCACCGCAAGCAGTGACTGCAACCAAGGATGGTATGACTGGTGATGCCACTGCCAATACACCTAAGCCTGCAGCTGTTGCATCTACCCAAGAGGCAGTGGCGGTTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90140.p1 GENE.R_Transcript_90140~~R_Transcript_90140.p1 ORF type:5prime_partial len:313 (+),score=81.55,Clathrin_lg_ch|PF01086.13|8.2e-09 R_Transcript_90140:2-940(+)
PNYKWSVLTARITIHTSSHFSLSDFTVGFLSSILEVHHLNNSISKSRERERMSSLNHDTFDESSHSFEDDVTGGGYAPPPQYTDFSDPHSVNNDDVFGGSNQEDPIFGEAANGPVFVESSNGPILPPPSEMQEEGSALREWRRQNAMILEQKEKREKEILSQIIDETNEYKTAFHEKRKVTCQNNKTNNREKEKSFLANHEKFHKEADKSYWKAIAELIPNEVPAIEKKRGKKDQEKKPSVIVVQGPKPGKPADLARMRQILLKLKHNTPSHLKLAPPQAVTATKDGMTGDATANTPKPAAVASTQEAVAVA*

Click here to download the sequence:
Link to NCBI Protein BLAST