Transcript Information: R_Transcript_90173.p1


Annotated TAIR IDAT4G28980.2
Annotated Gene NameCDK-activating kinase 1AT
Annotated Gene Symbol(s)CDKF;1, CAK1AT
Annotation TypeOrtholog
Chromosome Positionchr4:14288471-14290102 | Forward length=479
E-Value3.2E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.441583491532
Replicate 211.664611342388
Replicate 311.477380053418
Condition 2: 8 Hour
Replicate 18.572619384046
Replicate 211.95393054403
Replicate 313.432952932907
Condition 3: 24 Hour
Replicate 112.273041599716
Replicate 212.021734405765
Replicate 312.4810391506


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90173.p1 GENE.R_Transcript_90173~~R_Transcript_90173.p1 ORF type:complete len:477 (+),score=116.05,Pkinase|PF00069.21|6.5e-35,Pkinase|PF00069.21|7e-19,Pkinase_Tyr|PF07714.13|5.8e-18,Pkinase_Tyr|PF07714.13|2.9 R_Transcript_90173:140-1570(+)
ATGGATTCACCAACAGCAACAAATTTCAAGAGTTGGAGCATCTATGGAAGAAAAGAAATCACAATAAAGTATGACATAAAAGAGAGGATAGGCTCAGGTGCATATTCAGATGTATACAAAGCCTACAGGAGATCAGATGGGTGTCCAGTTGCCCTTAAAGAGATCCATGATTATCAAAGTGCATTTCGTGAGATTGAGGCTCTTCAAACTTTACAAAATTGCCCAAATGTTGTGGCTTTGCATGAGTATTTCTGGCGTGAAGATGAAGATGCTGTGCTTGTGCTTGAGTTTTTGAGAACAGATTTGGCTTCTGTTATTCAGGAAGCTAAGAAGAATTGGGATGGTGGGATTTCTGTTGGTGAGATCAAGAGATGGATGGTCCAGATTTTGCATGGGGTTGATGCTTGTCATAGGAATTCTATTGTTCACAGAGATCTTAAGCCTTCTAATCTCTTGATTTCTGATGATGGGGTCCTCAAGTTGGCTGATTTTGGTCAGGCAAGGATTCTCCTGGAACCAGGCTTTGTTGCTTCTGTGGATGACTTGCAACAACTTACGCCAACCTCTTCAGGTCAAGATCATCCAGCTACAATGTCTGCTGCTGCTGATAATTCAAGCGAGCAAGCTTTTGTGAACCCAGTGCATCGTACTGCCAGCAAAGAACAATTTTTCCGAGACTTGGTAGAGCAGAAAGCTAAAGCCGCTGCTCTAGATGACTATGATAAGGATTCAAATATCCCTGATGGAGATACTTCTTGTCTTGCTACCTGCACTGCTAGTGAAGTTGAGGATGATCTTCTCAAGGGTTCATATACCTATGAGCCAGATGATGGCGGAGAAGACAACTATGGTCCCCTAACTTCATGTGTTGGGACTCGATGGTTCAGAGCCCCTGAATTGCTTTATGGATCTATAAACTATGGAATCGAGGTTGATCTCTGGTCGTTAGGATGTATTTTTGGGGAGCTATTCAGCTTAGAGCCTCTTTTCCCTGGGACATCAGATATTGATCAACTTGCCAGAATTTTCAACGTCTTGGGCAACTTGACAGAGGAGACCTTTCCAGGTTGCTCAAACCTTCCTGATTACAAAATAATTTCGTTCTGTAAGATAGAAAAGCCACTCGGATTGGAAGCATGTTTGCCCAACCGCTCACCAGACGAAATCCTCATAGTTAAGAAGCTCCTATACTTTGATCCTGCAAGTAGGGCCACTGCAATGGAACTTCTACATGACAAGTACCTGAATGAAGAGCCTTTGCCCGTGCCAATATCTGAACTGAGGGTTCCGTTAACTAGGTGCGCCCCAGATGAGGATTCTCCAGGTGATTGGCATGACTACCGAGAAGCTGGATCAGACTCTGATTTCGAGGAATTTGGCAGTGTAGATGTTACAAAAACAGACACTGGCTTCTCTGTTCGGTTCGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90173.p1 GENE.R_Transcript_90173~~R_Transcript_90173.p1 ORF type:complete len:477 (+),score=116.05,Pkinase|PF00069.21|6.5e-35,Pkinase|PF00069.21|7e-19,Pkinase_Tyr|PF07714.13|5.8e-18,Pkinase_Tyr|PF07714.13|2.9 R_Transcript_90173:140-1570(+)
MDSPTATNFKSWSIYGRKEITIKYDIKERIGSGAYSDVYKAYRRSDGCPVALKEIHDYQSAFREIEALQTLQNCPNVVALHEYFWREDEDAVLVLEFLRTDLASVIQEAKKNWDGGISVGEIKRWMVQILHGVDACHRNSIVHRDLKPSNLLISDDGVLKLADFGQARILLEPGFVASVDDLQQLTPTSSGQDHPATMSAAADNSSEQAFVNPVHRTASKEQFFRDLVEQKAKAAALDDYDKDSNIPDGDTSCLATCTASEVEDDLLKGSYTYEPDDGGEDNYGPLTSCVGTRWFRAPELLYGSINYGIEVDLWSLGCIFGELFSLEPLFPGTSDIDQLARIFNVLGNLTEETFPGCSNLPDYKIISFCKIEKPLGLEACLPNRSPDEILIVKKLLYFDPASRATAMELLHDKYLNEEPLPVPISELRVPLTRCAPDEDSPGDWHDYREAGSDSDFEEFGSVDVTKTDTGFSVRFD*

Click here to download the sequence:
Link to NCBI Protein BLAST