Transcript Information: R_Transcript_90183.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value3.8E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 184.644892878044
Replicate 276.296415597252
Replicate 377.915170837617
Condition 2: 8 Hour
Replicate 181.389635599294
Replicate 296.844664312177
Replicate 399.002974827392
Condition 3: 24 Hour
Replicate 1107.59451204252
Replicate 298.705049471563
Replicate 3101.03796072015


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90183.p1 GENE.R_Transcript_90183~~R_Transcript_90183.p1 ORF type:complete len:284 (+),score=39.67,zf-CCHC|PF00098.19|2.8e-06,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|1.6e-06,zf-CCHC|PF00098.19|3e-05,zf-CCHC|PF00098.19|0.009,zf-CCHC|PF00098.19|3.3e-05,zf-CCHC|PF00098.19|0.0025,zf-CCHC|PF00098.19|0.00044,zf-CCHC|PF00098.19|3.3e-05,zf-CCHC_3|PF13917.2|0.054,zf-CCHC_3|PF13917.2|0.4,zf-CCHC_3|PF13917.2|1.8,zf-CCHC_3|PF13917.2|0.92,zf-CCHC_3|PF13917.2|0.011,zf-CCHC_3|PF13917.2|0.16,zf-CCHC_3|PF13917.2|1.8e+02,zf-CCHC_3|PF13917.2|0.53,zf-CCHC_3|PF13917.2|7e-05,zf-CCHC_4|PF14392.2|1.4,zf-CCHC_4|PF14392.2|0.23,zf-CCHC_4|PF14392.2|8.6,zf-CCHC_4|PF14392.2|0.084,zf-CCHC_4|PF14392.2|12,zf-CCHC_4|PF14392.2|6.2,zf-CCHC_4|PF14392.2|0.1,zf-CCHC_4|PF14392.2|1.2,zf-CCHC_4|PF14392.2|3,zf-CCHC_2|PF13696.2|0.0037,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|48,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|4.7,zf-CCHC_2|PF13696.2|0.39,zf-CCHC_2|PF13696.2|0.031,zf-CCHC_2|PF13696.2|1.7e+03,zf-CCHC_2|PF13696.2|7.6 R_Transcript_90183:321-1172(+)
ATGAGTTCTCGCAGCCAGAGCAGCAGCCACAGCAGGAGCAGAAGCAGGAGCCGTAGCAGGAGCAGGAGTCCCCAAGATCGTCGGATGCGATCTCAGCGCTATTCCTTTCGTGACGCTCCATATAGGAGGGAGGGGCGTCGGGGTTTCAGCCAAAACAATCTTTGCAACAACTGCAAGCGACCTGGTCACTTTGCCAGAGAGTGTCCGAATGTTGCTGTCTGTAACAACTGTGGGCTTCCGGGGCATATTGCAGCGGAATGCACTACAAAATCATTATGCTGGAACTGTCGAGAGCCGGGGCACATGGCCAGCAACTGCCCAAATGAGGGCATCTGCCATTCATGTGGCAAGGCTGGTCACCGTGCTAGAGAATGCCCAAACCCAGAACTCCCACCTGGGGATCTGAGATTATGTAACAACTGCTTTAAGCAGGGTCATATGGCTGCAGAGTGCACAAATGACAAGGCATGTAAGAATTGCAGGAAGACAGGCCACCTAGCTCGTGACTGCCAGAATGAGCCTGTTTGTAACTTGTGCAATATAGCTGGACATGTGGCCAGGCAATGCCCAAAGGCTGACATTCTTGGAGACCGGGGAAGTGGTGGAGGTGGTGGAGTCGGTGGTGGGCACCGTTATGGTGGGTTTGGTGGCGGAGGTGGTTTCGGTGGTTATCCTGTTGGTGGTGGTTACCGTGATATAGTCTGTCGGAGCTGCGGACATTTGGGCCATATGAGCAGAGAATGCATGGGCGCACCTCCTATGATTATCTGCCATACCTGTGGCGGTCGAGGGCACATGTCGTTTGAATGTCCTTCAGCAAGAATGATAGACCGTATGCCTAGGAGGTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90183.p1 GENE.R_Transcript_90183~~R_Transcript_90183.p1 ORF type:complete len:284 (+),score=39.67,zf-CCHC|PF00098.19|2.8e-06,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|1.6e-06,zf-CCHC|PF00098.19|3e-05,zf-CCHC|PF00098.19|0.009,zf-CCHC|PF00098.19|3.3e-05,zf-CCHC|PF00098.19|0.0025,zf-CCHC|PF00098.19|0.00044,zf-CCHC|PF00098.19|3.3e-05,zf-CCHC_3|PF13917.2|0.054,zf-CCHC_3|PF13917.2|0.4,zf-CCHC_3|PF13917.2|1.8,zf-CCHC_3|PF13917.2|0.92,zf-CCHC_3|PF13917.2|0.011,zf-CCHC_3|PF13917.2|0.16,zf-CCHC_3|PF13917.2|1.8e+02,zf-CCHC_3|PF13917.2|0.53,zf-CCHC_3|PF13917.2|7e-05,zf-CCHC_4|PF14392.2|1.4,zf-CCHC_4|PF14392.2|0.23,zf-CCHC_4|PF14392.2|8.6,zf-CCHC_4|PF14392.2|0.084,zf-CCHC_4|PF14392.2|12,zf-CCHC_4|PF14392.2|6.2,zf-CCHC_4|PF14392.2|0.1,zf-CCHC_4|PF14392.2|1.2,zf-CCHC_4|PF14392.2|3,zf-CCHC_2|PF13696.2|0.0037,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|48,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|4.7,zf-CCHC_2|PF13696.2|0.39,zf-CCHC_2|PF13696.2|0.031,zf-CCHC_2|PF13696.2|1.7e+03,zf-CCHC_2|PF13696.2|7.6 R_Transcript_90183:321-1172(+)
MSSRSQSSSHSRSRSRSRSRSRSPQDRRMRSQRYSFRDAPYRREGRRGFSQNNLCNNCKRPGHFARECPNVAVCNNCGLPGHIAAECTTKSLCWNCREPGHMASNCPNEGICHSCGKAGHRARECPNPELPPGDLRLCNNCFKQGHMAAECTNDKACKNCRKTGHLARDCQNEPVCNLCNIAGHVARQCPKADILGDRGSGGGGGVGGGHRYGGFGGGGGFGGYPVGGGYRDIVCRSCGHLGHMSRECMGAPPMIICHTCGGRGHMSFECPSARMIDRMPRRY*

Click here to download the sequence:
Link to NCBI Protein BLAST