Transcript Information: R_Transcript_90416.p1


Annotated TAIR IDAT5G46390.2
Annotated Gene NamePeptidase S41 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18816612-18819148 | Forward length=489
E-Value2.6E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3037829253371
Replicate 20.83318652445627
Replicate 30.27269925709705
Condition 2: 8 Hour
Replicate 11.5546580918886
Replicate 21.2422712133992
Replicate 31.6566946201147
Condition 3: 24 Hour
Replicate 11.8220481926749
Replicate 21.9254591094948
Replicate 31.2159835937165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90416.p1 GENE.R_Transcript_90416~~R_Transcript_90416.p1 ORF type:5prime_partial len:252 (+),score=54.77,Peptidase_S41|PF03572.14|1.7e-22,PDZ_2|PF13180.2|1.2e-06,PDZ_2|PF13180.2|4.6e+02,PDZ|PF00595.20|3.1e-07 R_Transcript_90416:2-757(+)
TCCAAGATGGCAAGATATGACATGACTGGGATTGGAATAAATCTGAGGGAGATTCCGGACAGCAATGGAAGCTTTAAACTGAAAGTGCTTGGACTCATATTGGACGGCCCAGCTCAGACTGCTGGAGTTAAACAGGGTGATGAAATTTTGTCTGTAGATGGGATGGATGTGAGAGGCAAATCAGCTTTTGAAGTATCATCGATGTTGCAAGGTCCCAGTGAGACTTTTGTGACAGTTGAGGTCAAGCATGGCAACTGTGGTCCAGTTCAATCTATCAAAGTGCAGAGGCAGCTGGTTGCTCGAACACCAGTACTTTATCGGTTAGAACAAATTGATAATGGTGCAGCCTCTGTTGGGTATGTGCGTCTCAAAGAGTTCAATGCACTGGCCAGAAAGGATATAGTCACAGCTATGAAGCGCCTCCAGGACTTAGGTGCCTCGTGCTTTGTTCTTGATCTAAGGGACAACTATGGTGGCCTAGTTCAGGCTGCGATTGAAATTGCAAAGCTGTTTCTGGATAAAGGGGATACGGTAACTTATACTGCTGGAAGAGATCAATCCCAGAATGCTGTTATGGTGGAGAATGCACCGTTGGTTACTGCTCCTGCCATTGTTTTGGTGAACCATAATACTGCAAGTGCAAGTGAAATTGTAAGATCTTTGTTGCTTGCATCTTCTGATAGTCAGCACAGCATGCTATTATGTAGCGGCATAACTCCTGTGGTTAATACAGGTAGCATCTGCTCTTCACGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90416.p1 GENE.R_Transcript_90416~~R_Transcript_90416.p1 ORF type:5prime_partial len:252 (+),score=54.77,Peptidase_S41|PF03572.14|1.7e-22,PDZ_2|PF13180.2|1.2e-06,PDZ_2|PF13180.2|4.6e+02,PDZ|PF00595.20|3.1e-07 R_Transcript_90416:2-757(+)
SKMARYDMTGIGINLREIPDSNGSFKLKVLGLILDGPAQTAGVKQGDEILSVDGMDVRGKSAFEVSSMLQGPSETFVTVEVKHGNCGPVQSIKVQRQLVARTPVLYRLEQIDNGAASVGYVRLKEFNALARKDIVTAMKRLQDLGASCFVLDLRDNYGGLVQAAIEIAKLFLDKGDTVTYTAGRDQSQNAVMVENAPLVTAPAIVLVNHNTASASEIVRSLLLASSDSQHSMLLCSGITPVVNTGSICSSR*

Click here to download the sequence:
Link to NCBI Protein BLAST