Transcript Information: R_Transcript_9044.p2


Annotated TAIR IDAT4G16444.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9274791-9276056 | Reverse length=178
E-Value1.7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.92965887884
Replicate 232.754228649425
Replicate 338.614214804943
Condition 2: 8 Hour
Replicate 128.403603338804
Replicate 237.438505025528
Replicate 343.771312467447
Condition 3: 24 Hour
Replicate 137.91317879318
Replicate 233.650023564481
Replicate 339.773086231048


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9044.p2 GENE.R_Transcript_9044~~R_Transcript_9044.p2 ORF type:complete len:175 (+),score=36.03,CHD5|PF04420.10|1.4e-11 R_Transcript_9044:90-614(+)
ATGGAAGAGGGTGGAAGCAGTTTAGCAGCTCCCGCGATATTCATCCTTGTTGCCCTAATTCAATTCGTTCCCAGATATCTCGACCACCAGATTAAGACCGGAGGAGCTGCTAGTGAGGAGGAAAAGAAGTTGCGTGCCGAAATAAAGCAGCTTCTGAAAGAAGCCAGCTCACTGACACAGCCATCAACATTTGCGCAAGCAGCAAAGCTTAGGAGGACAGCGGCAGCTAAGGAAAAAGAGCTTGCAAAATATCAGGAACAACAAATGCTGGAGAGGAGATCGTCATATTATCCATATATGAAGTATGTTACTCCTGTAAAGGCATTAAGCTATCTTTTGCTAGCAGTTTGGTTTTGGAAGTATCCTGTGGCAGCAATATCTAAGGAGCTTGTGCAACCCTTTGGGAGGGTGTTGTCTTGGAGATCTGGTGCTACTTCAAAGGACAAAGTGATGGTTGGGATCATACCCTGGCTGATATTATGTACAAGGGTGAGCAAACTTAGTTGCCGTAAATACCTTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9044.p2 GENE.R_Transcript_9044~~R_Transcript_9044.p2 ORF type:complete len:175 (+),score=36.03,CHD5|PF04420.10|1.4e-11 R_Transcript_9044:90-614(+)
MEEGGSSLAAPAIFILVALIQFVPRYLDHQIKTGGAASEEEKKLRAEIKQLLKEASSLTQPSTFAQAAKLRRTAAAKEKELAKYQEQQMLERRSSYYPYMKYVTPVKALSYLLLAVWFWKYPVAAISKELVQPFGRVLSWRSGATSKDKVMVGIIPWLILCTRVSKLSCRKYLG*

Click here to download the sequence:
Link to NCBI Protein BLAST