Transcript Information: R_Transcript_90557.p1


Annotated TAIR IDAT3G11890.2
Annotated Gene NameSterile alpha motif (SAM) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3756026-3757609 | Forward length=527
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5817130930014
Replicate 23.8031034716314
Replicate 32.5067750576921
Condition 2: 8 Hour
Replicate 12.402386749541
Replicate 23.3752274477261
Replicate 32.1918926032165
Condition 3: 24 Hour
Replicate 12.4257305750027
Replicate 22.4135943691575
Replicate 32.3952582487548


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90557.p1 GENE.R_Transcript_90557~~R_Transcript_90557.p1 ORF type:5prime_partial len:265 (+),score=53.79,SAM_2|PF07647.13|3.4e+03,SAM_2|PF07647.13|2.9e-15,SAM_1|PF00536.26|1.2e+04,SAM_1|PF00536.26|2.6e-10 R_Transcript_90557:2-796(+)
TATTTATCAGCAGTTGTCAAAAGTAACAGTAGTCAAGATGCTTATGATTCCGATTTATCTGGAGAAGGTAGTTGGGTTGTTGTTAAAAAGCAGAGAGTCAACATTCTGATCCCTCGTCTTTCTGGTATTGAGCAATCAATCATGCCTGATAGCAGACAAGGTCAGCTGGAGGATGATCTGCCTAGCACTATCCCTCAACTCCCAACAGAGGATCCTCATGAAGTTTGCGTTTTTGGGTTGAATGAAAATCCTCACGAGGCATGCCATGTCAGCATAAATGACGGATCAATGTCTTCAGCTCAGAAAACAAATTGTCAATCTCCTCAAAAGGTTAACCCTCCGCCAGATAATTTCGTGAAGCCACAAAAGTTGGATTCAGAGAAACTGGATAATGAAGATCAGGTTGATGCTTTGGGCGCCTTGCACAGAAAGGAGATCAGCGTTATGAAATTCCATAAAACCTCCACTGCTCATATGCCTTTTAGACGTTTCAAACATTTAGGGCTAGTTGGACTACATGACTTGTCCAGTGCCTCTGTTCTTGATAGAATGATGAGGGCATCTAGTCTTGAAAGGAAGATTGTTAGAGCTGGTGGATTGAGCAGGTGGCTTTCTTCTCTGGGATTGGAGCAGTTTGTCACGATTTTCAGCCGAAAGCATTTTACTAAATTCCAGTTGGCAAGGCTGTCCATGAAGAAGCTCAAGGATATGGGTGCTCATGCAGTTGGACCAAGAAGAAAGTTGTTACATGCCATAGAATGTCTTAGCGAGCCATGTTGTTTTAAAGCCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90557.p1 GENE.R_Transcript_90557~~R_Transcript_90557.p1 ORF type:5prime_partial len:265 (+),score=53.79,SAM_2|PF07647.13|3.4e+03,SAM_2|PF07647.13|2.9e-15,SAM_1|PF00536.26|1.2e+04,SAM_1|PF00536.26|2.6e-10 R_Transcript_90557:2-796(+)
YLSAVVKSNSSQDAYDSDLSGEGSWVVVKKQRVNILIPRLSGIEQSIMPDSRQGQLEDDLPSTIPQLPTEDPHEVCVFGLNENPHEACHVSINDGSMSSAQKTNCQSPQKVNPPPDNFVKPQKLDSEKLDNEDQVDALGALHRKEISVMKFHKTSTAHMPFRRFKHLGLVGLHDLSSASVLDRMMRASSLERKIVRAGGLSRWLSSLGLEQFVTIFSRKHFTKFQLARLSMKKLKDMGAHAVGPRRKLLHAIECLSEPCCFKAL*

Click here to download the sequence:
Link to NCBI Protein BLAST