Transcript Information: R_Transcript_90558.p1


Annotated TAIR IDAT3G11890.2
Annotated Gene NameSterile alpha motif (SAM) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3756026-3757609 | Forward length=527
E-Value6E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5236214242497
Replicate 28.2620821132725
Replicate 38.7657551811991
Condition 2: 8 Hour
Replicate 16.5413502025132
Replicate 27.4267188786609
Replicate 38.0601014668144
Condition 3: 24 Hour
Replicate 17.6249756857357
Replicate 26.5289936065969
Replicate 36.0843078010509


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90558.p1 GENE.R_Transcript_90558~~R_Transcript_90558.p1 ORF type:complete len:277 (+),score=53.56,SAM_2|PF07647.13|1.6e+03,SAM_2|PF07647.13|5.8e-15,SAM_1|PF00536.26|4.2e+03,SAM_1|PF00536.26|8.5e-10 R_Transcript_90558:49-879(+)
ATGAATTTATGCTGTGCAGTTCTCTGGAAAATGTTGAAGGCCAAATATTTATCAGCAGTTGTCAAAAGTAACAGTAGTCAAGATGCTTATGATTCCGATTTATCTGGAGAAGGTAGTTGGGTTGTTGTTAAAAAGCAGAGAGTCAACATTCTGATCCCTCGTCTTTCTGGTATTGAGCAATCAATCATGCCTGATAGCAGACAAGGTCAGCTGGAGGATGATCTGCCTAACACTATCCCTCAGCTGGGTCCTCATGAAGTTTGCGCTGTTGGGTTGAATGAAAATCCTCACGAGGCATGCCATGTCAGCATAAATGACGGATCAATGTCTTCAGCTCAGAAAACAAATAGTCAATCTCCTCAAAAGGTTAATCCTCCACCACATAATTTCGTGAAGCCACAAAGGTTAGATTCAGAGAAACTGAATAATGAAGATCAGGTTGATGCTTTGGGCGTCTTGCACAGAAAGGAGATCAGGGTTACGAAATTCCATAAAACCTCCACCGTTTGTATGGCTTTCAGACATTTCGAACATTTAAGGCTCGCTGGACTTCATGACTTGTCCAGTGCCTCTGTTCTTGATAGAATGATGAGGGCATCTAGTCTTGAAAGGAAGATTGTTAGAGCTGGTGGATTGAGCAGGTGGCTTTCTTCTCTGGGATTAGAGCAGTTTGTCACGATTTTTAGCCGAAAGCATGTTACTAAATTCCAGTTGGTTAATCTGTCCATGAAGAAGCTCAAGGATATGGGTGCTCATGCAGTTGGACCAAGAAGAAAGTTGTTACATGCCATAGAGTGTCTTAGCGAGCCATGTTGTTTCAATGCCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90558.p1 GENE.R_Transcript_90558~~R_Transcript_90558.p1 ORF type:complete len:277 (+),score=53.56,SAM_2|PF07647.13|1.6e+03,SAM_2|PF07647.13|5.8e-15,SAM_1|PF00536.26|4.2e+03,SAM_1|PF00536.26|8.5e-10 R_Transcript_90558:49-879(+)
MNLCCAVLWKMLKAKYLSAVVKSNSSQDAYDSDLSGEGSWVVVKKQRVNILIPRLSGIEQSIMPDSRQGQLEDDLPNTIPQLGPHEVCAVGLNENPHEACHVSINDGSMSSAQKTNSQSPQKVNPPPHNFVKPQRLDSEKLNNEDQVDALGVLHRKEIRVTKFHKTSTVCMAFRHFEHLRLAGLHDLSSASVLDRMMRASSLERKIVRAGGLSRWLSSLGLEQFVTIFSRKHVTKFQLVNLSMKKLKDMGAHAVGPRRKLLHAIECLSEPCCFNAL*

Click here to download the sequence:
Link to NCBI Protein BLAST