Transcript Information: R_Transcript_90575.p1


Annotated TAIR IDAT5G36170.1
Annotated Gene Namehigh chlorophyll fluorescent 109
Annotated Gene Symbol(s)HCF109, ATPRFB
Annotation TypeOrtholog
Chromosome Positionchr5:14236083-14237974 | Reverse length=456
E-Value1.2E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99283888038219
Replicate 20.87850629356896
Replicate 31.7251936264885
Condition 2: 8 Hour
Replicate 10.7171592243963
Replicate 21.4034026260158
Replicate 32.3543930093389
Condition 3: 24 Hour
Replicate 11.9211554165443
Replicate 20.46140708976103
Replicate 30.91580354338482


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90575.p1 GENE.R_Transcript_90575~~R_Transcript_90575.p1 ORF type:complete len:239 (+),score=52.71,PCRF|PF03462.14|2.8e+03,PCRF|PF03462.14|1.7e-16 R_Transcript_90575:93-809(+)
ATGGAGGGAACTACACGAATAGTCTACCCAAATTCCTTACTTCCTATCTCCAACAAAACACCCTTGTTTTCCTTTAATTCCCAAAATCTTCGTTTCTCTAATCACTTTCTCTCTTTTCCCAAGTTCAATTCTTTTTCCTCCTATCTCTTAATAACCCCATCTCGTTTCCCTTCTTCTCCTGCTCAATTTGCAACCCCAGATAGTCAAGTGAGTGCTGAGGTCAGCACTGAAACTAGGGAGTGGGCCATCCAAGATTTTTATACACTAAGAAAGGATGTTGAAAACACCAGTAAGCGCGTAGAAGAGATTGTAGTCTCTGCTGGATTGCAACATCTAGAGGAAGAGCTTGCAACTTTGGAGTCTAAAGCAGCTGACAGCAATTTGTGGGATGACCGTGCTAAGGCACAAGAAATTCTTTCAGCTTTGACTGGTGTCAAAGACAAAATAAAACTTCTCAAAGATTTCCAAAACCAGGTGGAAGAGGCTGAAACAATAGTTAATCTCACTGAAGAGATGGATTCTATTGATACTGCGCTTCTTCAAGAGGCTGCCAGCATTATTAAGGAATTAAACAAGGCTCTTGATCGTTTTGAATTGACACAGCTACTTTCTGGTCCATATGATAAAGAGGGGGCTGTTATCACTATCTCAGCTGGTGCTGGTGGCACTGATGCTCAGTGCAGGATTGGGCTGACATGCTTCTCAGGATGTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90575.p1 GENE.R_Transcript_90575~~R_Transcript_90575.p1 ORF type:complete len:239 (+),score=52.71,PCRF|PF03462.14|2.8e+03,PCRF|PF03462.14|1.7e-16 R_Transcript_90575:93-809(+)
MEGTTRIVYPNSLLPISNKTPLFSFNSQNLRFSNHFLSFPKFNSFSSYLLITPSRFPSSPAQFATPDSQVSAEVSTETREWAIQDFYTLRKDVENTSKRVEEIVVSAGLQHLEEELATLESKAADSNLWDDRAKAQEILSALTGVKDKIKLLKDFQNQVEEAETIVNLTEEMDSIDTALLQEAASIIKELNKALDRFELTQLLSGPYDKEGAVITISAGAGGTDAQCRIGLTCFSGCI*

Click here to download the sequence:
Link to NCBI Protein BLAST