Transcript Information: R_Transcript_90647.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeHomolog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15966768377413
Replicate 30
Condition 2: 8 Hour
Replicate 10.74481718470708
Replicate 21.2753354662273
Replicate 31.2423155557679
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.5812410230078


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90647.p1 GENE.R_Transcript_90647~~R_Transcript_90647.p1 ORF type:complete len:263 (+),score=27.05,LRR_8|PF13855.2|1.4e-06,LRR_8|PF13855.2|2.5e-07,LRR_8|PF13855.2|6.6,LRR_8|PF13855.2|90,LRRNT_2|PF08263.8|4.4e-09,LRR_4|PF12799.3|6.9,LRR_4|PF12799.3|7.1e-05,LRR_4|PF12799.3|0.1,LRR_4|PF12799.3|2.3e+03,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|6.4,LRR_1|PF00560.29|0.028,LRR_1|PF00560.29|59,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|1.6e+04 R_Transcript_90647:104-892(+)
ATGTTGAGCCCTCCAATGATTCTCATCTCATTCATTCTCTATTCAAACTTCTTCCACTCCTCCCTAGCCGACATACCAGGTTGTGACCCAAACGATCAGGCCGTACTCCTTCAAATCAAGGCCAAAATCAAGAGCCCCAATCCGGGTATTGGGGACCTCTCGGACTGGGATCCCAACACAGACTGTTGTTACTGGGATTTCATCGGTTGCAACAGTGCCCCCGGCCCGAGTTACGGCCGTGTCAACGGGGTCACCATCTCCAGAGGCAGTGGCCTCGTAGGGCAGATTCCCGAGGAGCTTGGGAACCTGCCCTACTTAACGGAGATCATGTTCATGGATGAGCCCAAGCTCACGGGTCCCCTCCCTAGCTCCTTAAGCAAGCTCAAGCGGCTCCAAGTCATCTACTTGGGCTCCAACAGCTTATCAGGCTCTGTGCCTGCTTATCTTGGCAAGCTTACCAAACTCAGAGAAATCGATATCTCCGGTAACCACTTCACCGGCAGCCTCCCGGCCTCGCTCTCGAAGCTCGGGAGGCTTAACAGCTTCAATGTGTCTCATAATAAGCTGAGTGGCTCCATACCAAACTTGAAAACAAGCAATTTGAAGAGTTTTGATGTTAGCTACAACCAGCTTTGTGGGGCTATTCCTTCTGGGTTGGGGAAGTTTAGTAAGGTTTATTTTTCCCACAATAAGTGCCTTTGTGATCCTCCTCTAGCACCTTGCAACAAGTTGCAAAGTGGAGTGATGATGAATATCATTGCGAATGCTGTTGAGTCAGGGATAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90647.p1 GENE.R_Transcript_90647~~R_Transcript_90647.p1 ORF type:complete len:263 (+),score=27.05,LRR_8|PF13855.2|1.4e-06,LRR_8|PF13855.2|2.5e-07,LRR_8|PF13855.2|6.6,LRR_8|PF13855.2|90,LRRNT_2|PF08263.8|4.4e-09,LRR_4|PF12799.3|6.9,LRR_4|PF12799.3|7.1e-05,LRR_4|PF12799.3|0.1,LRR_4|PF12799.3|2.3e+03,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|6.4,LRR_1|PF00560.29|0.028,LRR_1|PF00560.29|59,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|1.6e+04 R_Transcript_90647:104-892(+)
MLSPPMILISFILYSNFFHSSLADIPGCDPNDQAVLLQIKAKIKSPNPGIGDLSDWDPNTDCCYWDFIGCNSAPGPSYGRVNGVTISRGSGLVGQIPEELGNLPYLTEIMFMDEPKLTGPLPSSLSKLKRLQVIYLGSNSLSGSVPAYLGKLTKLREIDISGNHFTGSLPASLSKLGRLNSFNVSHNKLSGSIPNLKTSNLKSFDVSYNQLCGAIPSGLGKFSKVYFSHNKCLCDPPLAPCNKLQSGVMMNIIANAVESGIS*

Click here to download the sequence:
Link to NCBI Protein BLAST