Transcript Information: R_Transcript_90705.p1


Annotated TAIR IDAT5G50570.1
Annotated Gene NameSquamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Annotated Gene Symbol(s)SPL13A, SPL13
Annotation TypeOrtholog
Chromosome Positionchr5:20582555-20583791 | Reverse length=359
E-Value2.5E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7540773980572
Replicate 24.6570741524872
Replicate 35.3391644021107
Condition 2: 8 Hour
Replicate 16.0754401748804
Replicate 25.2119348652387
Replicate 37.8475008321222
Condition 3: 24 Hour
Replicate 110.18429042432
Replicate 27.0477331041318
Replicate 38.228460408608


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90705.p1 GENE.R_Transcript_90705~~R_Transcript_90705.p1 ORF type:3prime_partial len:266 (+),score=42.21,SBP|PF03110.10|8.7e-31 R_Transcript_90705:1388-2182(+)
ATGGGCTATAATCTAAAGACAAATTACTGTGACTTTGCTGAATTGGAGAGGGGAGGAATAGCCACCATTTTTGGGTCAAATAGCCAGAGCACAGAAGGGGAAAGCATTGTGGATTTGAAACTTGGTAGTTTAGGTGACTTTGGGGAAGGCTTGACAAACCGTTTCAAGGATCCTGGAGGTTCTTTAATGGAGACGTTTTCATCATCACCAGCTGGATCTTCAAAGAGGTCCCGCACACCTAGTAGCGGGGGGCAAGTCGTGTCATGTTTGGTTGACGGGTGCAAATCAGACCTTAGTAAATGCAGGGACTACCACCGACGCCACAAAGTTTGTGAGATGCATTCAAAGACCCCAAGAGTTACGATTGGAGGTCATGAACAACGCTTTTGTCAGCAATGCAGCAGGTTTCATGCATTGGGGGAGTTTGATGAAGGGAAAAGGAGCTGTAGGAAACGTCTTGAGGGGCATAATCGACGCAGACGAAAGCCTCAGCCTGAACCCCTGCCTGTGAATCAGGGAAATTTCCTTTCTGCTAGCCAAGGAAGTAGATTTTTGCCATTCAGTAATCAGCCAATAATTCCAGCAAGTTCAGTAGTGAGTACTACTACTTGGTCTGGAGCTGTTAAGACTGAGAGCAACCCAGCCCTATACAGTAGCTCGGTATCAGGTCCTTACTCCCAACCCTACAGAGGTAGGCAGTTCCCCTTCCTACAACGACCTGATTCCCCTCTTACTGGAGGAGCTTCTTCAGCTGGTCAGATGCTTCATCATGACCCTAATTCCGTATCAGGAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90705.p1 GENE.R_Transcript_90705~~R_Transcript_90705.p1 ORF type:3prime_partial len:266 (+),score=42.21,SBP|PF03110.10|8.7e-31 R_Transcript_90705:1388-2182(+)
MGYNLKTNYCDFAELERGGIATIFGSNSQSTEGESIVDLKLGSLGDFGEGLTNRFKDPGGSLMETFSSSPAGSSKRSRTPSSGGQVVSCLVDGCKSDLSKCRDYHRRHKVCEMHSKTPRVTIGGHEQRFCQQCSRFHALGEFDEGKRSCRKRLEGHNRRRRKPQPEPLPVNQGNFLSASQGSRFLPFSNQPIIPASSVVSTTTWSGAVKTESNPALYSSSVSGPYSQPYRGRQFPFLQRPDSPLTGGASSAGQMLHHDPNSVSGN

Click here to download the sequence:
Link to NCBI Protein BLAST