Transcript Information: R_Transcript_90731.p1


Annotated TAIR IDAT2G01440.1
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:193950-199056 | Reverse length=973
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8778573841299
Replicate 27.820911098842
Replicate 39.199493010503
Condition 2: 8 Hour
Replicate 16.9819132982105
Replicate 28.0822464486213
Replicate 39.6589895871537
Condition 3: 24 Hour
Replicate 111.064003483231
Replicate 28.5253761775826
Replicate 39.3396330240275


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90731.p1 GENE.R_Transcript_90731~~R_Transcript_90731.p1 ORF type:complete len:996 (+),score=198.33,Helicase_C|PF00271.27|22,Helicase_C|PF00271.27|1.9e-17,DEAD|PF00270.25|5.8e+03,DEAD|PF00270.25|4.7e-14 R_Transcript_90731:199-3186(+)
ATGGAACGGTTTGTCTCTTCTCTGCAACCTTGTGCAAAGAATTTGGTTGCAAGCGGTTTGAGAACTGCAATAGCCTTTGAGGCTGAAGCAGGTTATCAGAATTCTTGGAGAAGAAACATGAGATTTAATCAGTTCCTGGTTTCTAAGATATCGAAACTATGTTATAGATCAAAGCATAGGCTGGCAGAAAAGGTGCTTGAGGAAGCGGACAACTATGGTGCTGCGAGCATCTCAGACCGCTCAAAGCTTCTTGAAAAGGTATCTGTTATGTTGGGATATAGTAACCTTGCTGAGTTAGTTGATAATCAAAGAAATCAACTAGAAGCTGGTTTGGTTGTGGAAGATCAGATGGATGCTTTGAGTGTCTCTTTAGCTTGCAGACAATTTTCATCAATCACTTTGGGGAGTTCACCCCTAGTGGAACTGTATACTGGTTCAGCTTGGTATTCTCAAATAAAGACCTATTCTGCAGCTCTTAGTTCTGAAGAACTTCAGCCTATCTTGGCAGATGGGAAATGGATGATTCCAGAGAGTCTGACAGAAAGCTGTTCCTTTTATCCTTCCTCTCCAAACACAAGTTTCTCTGTTAGGACAGATGAAGATTTACCTTCACCATTTGAATCTCAATCTGACAATCTGCAAGCTGAGCAATTAGGTCTTTCAATTGTTGAAAATTCTCCTCCCCGTTCACCGCTGGAAGATGAAAAGTTAAATGAATTGATGCTGGACATGCCTATCAGCAGTATACGTGGATTGAGCAAAAGGCGCTGTCGCCAACTGGAAGATTGCGGTTTCTATACGGTCCGCAAATTATTGCACCACTTTCCTCGCACCTATGCTGATTTGCAGAACTCACATTTTGGCATTGAAGATGGCCAATACTTGATTTTTGTAGGAAGGATCTTATCTTCTAGGGCTGTTAAGGCTAGCTATTCCCTTTCATTTCTCGAGGTGATTGTGCGTGTTGAGATTATTGATCGTATGGCAAAATCTGAAGTTGAATCAGATGACACATGCAGTGAAGGAAAGAAAATACTTCACTTGCATTTGAAGAAATTTTTTCGTGGCACTCGTTTCACTAGTCAAGGTTTTCTCAGATGTCTCAAGAATAAGCATATAGAAGGTGATATTGTATGTGTTAGTGGCAAGGTGAGGAGTACCTCTAAGGAAGACCACTATGAAATGAGAGAGTATAGCTTTGATGTGATTGAAAATGAAGAGGATTCATCTGTTCTAGAAAAGGGCAAGCCGTATCCTATATATCCATCGAAAGGTGTACTCAAGCCAGAGTTCTTCAGGGAAATTATTATAAGATCTTTGCAGTCATTGGCTATTAATGTTGACCCTATTTCTGAAGACATCACACGAGATATTGGACTTCTGCACCTCCATGATGCATATGTTGGGATTCATCAACCTAAGGATATAAATCATGCGGATTCTGCTCGCAAACGATTTGTATTTGACGAATTCTTTTATCTTCAGTTGGGACGTTTGTACCAAATGCTTGAAGGTCTTGGATCAAGGCTAGAGAAAGAAGGATTGTTGGATAAATACAGAAATATAGGGCAGCATTCTATTTTAATTGAGGATTGGTCTGATCTCACTAAGAGATTTTTCAGAGGATTACCATATGCGCTAACCAAGAGTCAACTAAGTGCAGTGTCAGAGATTATTTGGGACCTAAAACGACCCGTTCCTATGAATCGGCTTCTTCAGGGAGATGTTGGTTGTGGAAAAACAGTAGTGGCTTTTCTGGCATGCATGGAAGTCATTGGTTCTGGATTCCAGGCTGCGTACATGGTTCCAACTGAACTACTTGCTATCCAGCATTACAAACATTTGAGTGACCTCTTAGAGACTGTGCAGTCTGACCGCAAACCTTCCATAGCCCTCCTGACGGGCTCAACTCCTGCAAAACAAGCACGGATGATCCGCAATGATCTCCAAACAGGGAGTATATCTTTGGTCATTGGAACACATAGTTTGATAGCTGAAAGTGTGGAATTTTCAGCTTTGCGACTTGCAGTGATAGATGAGCAACATCGTTTTGGTGTCATCCAAAGAGGAAGGTTCAATAGTAAGTTATGGTATGCTTCCTCTGGAATCAGGGCAACTTCACTTGGGGGCTCTCCAAAAGATGAGAACCAGATGGCTCCACATGTTCTTGCTATGTCTGCCACTCCAATCCCGAGGAGTCTTGCTTTGGCTCTATATGGAGACATGTCTTTAACACAGATAACAGATTTACCTCCTGGGAGATTGCCTATTGAGACAAATATTATTGAAGGGAATCAGGAAGGGTTTGAGAAGGTTTATGAGATGATGCATCGTGAACTGGAAACGGGTGGAAAAGTGTATCTTGTATACCCAATTATTGAGCAGTCTGAGCAACTACCTGAGCTCCGTTCTGCTTCAGGAGATTTTGAGACTATATGTTCCAGGTTCCCATGTTACAGCTGTGGTTTATTACATGGAAAAATGAAGAGTGATGAAAAAGATGAAGCATTAAGACGATTTAAGGATGGAGAAACTCCAATTCTTCTCGCTACTCAAGTAATTGAGATAGGGGTCGATGTGCCAGATGCATCAATGATGGTTGTAATGAATGCCGAGAGATTTGGGATGGCACAGCTACACCAACTTCGAGGGCGAGTTGGTCGTGGTTCTAGGAAATCCAAGTGTCTGCTTGTGGCATCTAGTGCAAGCAGTATGAGCCGCTTGAAGGTGTTGGAACACTCATCAGATGGATTTCATCTGGCAAAGGTTGACCTTCTTCTTCGTGGACCTGGTGACTTGCTGGGTAAGAAGCAGTCAGGACATCTTCCGGAATTTCCTATTGCTCGACTGGAGGTTGATGGATCTATTATACAAGATGCCCATATTGCTGCACTGAGAATACTTAGTTCCTCACATGATCTCGAGCAGTACCCATTACTTAAAGCCGAGCTTAGCATGCGACAGCCTTTATCTCTTCTTGGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90731.p1 GENE.R_Transcript_90731~~R_Transcript_90731.p1 ORF type:complete len:996 (+),score=198.33,Helicase_C|PF00271.27|22,Helicase_C|PF00271.27|1.9e-17,DEAD|PF00270.25|5.8e+03,DEAD|PF00270.25|4.7e-14 R_Transcript_90731:199-3186(+)
MERFVSSLQPCAKNLVASGLRTAIAFEAEAGYQNSWRRNMRFNQFLVSKISKLCYRSKHRLAEKVLEEADNYGAASISDRSKLLEKVSVMLGYSNLAELVDNQRNQLEAGLVVEDQMDALSVSLACRQFSSITLGSSPLVELYTGSAWYSQIKTYSAALSSEELQPILADGKWMIPESLTESCSFYPSSPNTSFSVRTDEDLPSPFESQSDNLQAEQLGLSIVENSPPRSPLEDEKLNELMLDMPISSIRGLSKRRCRQLEDCGFYTVRKLLHHFPRTYADLQNSHFGIEDGQYLIFVGRILSSRAVKASYSLSFLEVIVRVEIIDRMAKSEVESDDTCSEGKKILHLHLKKFFRGTRFTSQGFLRCLKNKHIEGDIVCVSGKVRSTSKEDHYEMREYSFDVIENEEDSSVLEKGKPYPIYPSKGVLKPEFFREIIIRSLQSLAINVDPISEDITRDIGLLHLHDAYVGIHQPKDINHADSARKRFVFDEFFYLQLGRLYQMLEGLGSRLEKEGLLDKYRNIGQHSILIEDWSDLTKRFFRGLPYALTKSQLSAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGFQAAYMVPTELLAIQHYKHLSDLLETVQSDRKPSIALLTGSTPAKQARMIRNDLQTGSISLVIGTHSLIAESVEFSALRLAVIDEQHRFGVIQRGRFNSKLWYASSGIRATSLGGSPKDENQMAPHVLAMSATPIPRSLALALYGDMSLTQITDLPPGRLPIETNIIEGNQEGFEKVYEMMHRELETGGKVYLVYPIIEQSEQLPELRSASGDFETICSRFPCYSCGLLHGKMKSDEKDEALRRFKDGETPILLATQVIEIGVDVPDASMMVVMNAERFGMAQLHQLRGRVGRGSRKSKCLLVASSASSMSRLKVLEHSSDGFHLAKVDLLLRGPGDLLGKKQSGHLPEFPIARLEVDGSIIQDAHIAALRILSSSHDLEQYPLLKAELSMRQPLSLLGD*

Click here to download the sequence:
Link to NCBI Protein BLAST