Transcript Information: R_Transcript_90752.p1


Annotated TAIR IDAT2G20710.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8926110-8927722 | Forward length=490
E-Value2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.766696809831
Replicate 26.820454275358
Replicate 38.1705560852518
Condition 2: 8 Hour
Replicate 14.1329644656178
Replicate 26.6940219524568
Replicate 36.3010368077139
Condition 3: 24 Hour
Replicate 18.2618860405432
Replicate 27.7263645795016
Replicate 38.2950218399388


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_90752.p1 GENE.R_Transcript_90752~~R_Transcript_90752.p1 ORF type:complete len:314 (+),score=65.13,PPR|PF01535.16|0.62,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.15,PPR|PF01535.16|0.0085,PPR|PF01535.16|83,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|2.5e+03,PPR_2|PF13041.2|2,PPR_2|PF13041.2|17,PPR_2|PF13041.2|0.0074,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|18,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|7.9e+03 R_Transcript_90752:2593-3534(+)
ATGCTTAAGATGTATTATCAGTTGGAAATGTATGATAAAGTTGAGGATATAATGCAAGAAATGGGAGAGAAGGGTTTAGGGGGAGATGCATTTACGCACAGAATTCAGTTAGTTGCATTTTCAAATTCTGGCAAAGTCAAGGAAATGGAGATGGTGCTCATGAAGCTGGAAGCCAATCCTGTGAACCATATGAATTTCTCTGATTATATCACTGCTGCAAATGGGTTCTTGAAGGCTGGTGTTCTTGATAAGTCTCTTGTAATGCTGAGGAGAGCTGAACATCTAGCCCTTGGTATGACTAAAAAGCATGTGTACCAGTGCCTCCTGACGCTGTATGCTCATGCTAAAGTTAGCGAAGAGGTGTATCGCATATGGAATTTGTTTAAAAGGTTATGGAATGTTCACAATAAAACCTATCTTTGCATGATTAGCGCCCTTGTGATTCTAGATGATCTTGAAGGAGCTGAAAGGATCATAGACGAGTGGGTCCGTGGGCTATCTGCTGGTCAAAAAGTGGATTTTCGAATCATCAATCCACTTGTCCGTGCTTACTGCAAGAAGGGTGATTTAGAGAGGGCCCATGCTTTGGTCGATAGGCTGAGAGAGATAAGTGGTCAAGAGCCTAAGAGAAACACATGGGAAATCCTGTCAACTGGTTATCGTATGCATAACCTAATGGAAGATGCGGTAAAGACACTGAAGGCAGCTATTGTTGCAGATGGTAAAGAATGGAAGCTCCATAAAGCCTCCGTGGTTGGATGTCTAGAGTACTTGAGAATGAAGGACAGCCCAGAAGAGTTGCAGGAGTTCATAACCATACTAGAAGACCATGGTTATTCATCAGGAGATCTGTTGTCTGATCATTCAGACGGCATAGAGAGGCAACTTGAAGAAGATGTTGATCTAAAATCTCTAGGCTTCGTCAGTGAAAAGGCAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_90752.p1 GENE.R_Transcript_90752~~R_Transcript_90752.p1 ORF type:complete len:314 (+),score=65.13,PPR|PF01535.16|0.62,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|0.15,PPR|PF01535.16|0.0085,PPR|PF01535.16|83,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|2.5e+03,PPR_2|PF13041.2|2,PPR_2|PF13041.2|17,PPR_2|PF13041.2|0.0074,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|18,PPR_3|PF13812.2|5.2e+02,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|7.9e+03 R_Transcript_90752:2593-3534(+)
MLKMYYQLEMYDKVEDIMQEMGEKGLGGDAFTHRIQLVAFSNSGKVKEMEMVLMKLEANPVNHMNFSDYITAANGFLKAGVLDKSLVMLRRAEHLALGMTKKHVYQCLLTLYAHAKVSEEVYRIWNLFKRLWNVHNKTYLCMISALVILDDLEGAERIIDEWVRGLSAGQKVDFRIINPLVRAYCKKGDLERAHALVDRLREISGQEPKRNTWEILSTGYRMHNLMEDAVKTLKAAIVADGKEWKLHKASVVGCLEYLRMKDSPEELQEFITILEDHGYSSGDLLSDHSDGIERQLEEDVDLKSLGFVSEKAR*

Click here to download the sequence:
Link to NCBI Protein BLAST